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Codeine edited this page Apr 11, 2018
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Welcome to the McNeuron wiki!
McNeuron is a package for working on neuron morphologies. You can use it to:
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Read .swc or .hoc formats and extract the dendrogram of a neuron, downsample or upsample a neuron.
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Extract various features of a neuron; starting from simple ones, e.g. number of branching nodes to more sophisticated ones, e.g. distribution of branching motif or spatial density of neuron.
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Edit neuron; adding node, slide a part of neuron, ...
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Do above functions on a collection of neurons.
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Visualize neuron, its dendrogram, and features.
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Run Monte Carlo method to generate new neuron.