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extract_results.sh
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extract_results.sh
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# Author: Dreycey Albin
# Date: 08/16/2019
# Extract Results
## Create a results directory if it doesn't already exist
results_dir=DA_cyrano_2019;
input_dir=cyrano_simulations/;
if [ ! -d $results_dir ]; then
mkdir $results_dir;
mkdir $results_dir/${input_dir}
fi;
## Pulling out the major resuts from the different simulations
for pdb_directory in ${input_dir}*;
do echo working on $pdb_directory;
mkdir ${results_dir}/${pdb_directory};
for sequence_file in ${pdb_directory}/sequence.txt;
do cp $sequence_file ${results_dir}/${sequence_file};
done;
for secondary_file in ${pdb_directory}/secondary.txt;
do cp $secondary_file ${results_dir}/${secondary_file};
done;
for pdb_file in ${pdb_directory}/*AA.pdb;
do cp $pdb_file ${results_dir}/$pdb_file;
done;
for energy_file in ${pdb_directory}/RMSDVvsENERGY.txt;
do cp $energy_file ${results_dir}/$energy_file;
done;
done;