{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":33389183,"defaultBranch":"develop","name":"mdanalysis","ownerLogin":"MDAnalysis","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2015-04-04T00:39:41.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/11445951?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1719062494.0","currentOid":""},"activityList":{"items":[{"before":"f8423bf31732b216cf0b9dae1cb32d3d762649a5","after":"093228d17c1ed4681075f6f0230d585ca128e20e","ref":"refs/heads/gh-pages","pushedAt":"2024-07-04T10:52:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"rebuilt html docs for version 2.8.0-dev0 from branch develop with sphinx at cfda8b7","shortMessageHtmlLink":"rebuilt html docs for version 2.8.0-dev0 from branch develop with sph…"}},{"before":"cfa44384431059d176e9eacc2f1054a25d272994","after":"cfda8b792ef906820fd330e016b64ff5f6733600","ref":"refs/heads/develop","pushedAt":"2024-07-04T10:49:14.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"hmacdope","name":"Hugo MacDermott-Opeskin","path":"/hmacdope","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24581003?s=80&v=4"},"commit":{"message":"No need to redirect to the original frame explicitly during deserialization (#3722)","shortMessageHtmlLink":"No need to redirect to the original frame explicitly during deseriali…"}},{"before":"8a64999364de3a936c9bf1e7f262f3b85a9122b1","after":"f8423bf31732b216cf0b9dae1cb32d3d762649a5","ref":"refs/heads/gh-pages","pushedAt":"2024-06-22T14:35:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"rebuilt html docs for version 2.8.0-dev0 from branch develop with sphinx at cfa4438","shortMessageHtmlLink":"rebuilt html docs for version 2.8.0-dev0 from branch develop with sph…"}},{"before":"8dae8559e73e3822082f67cfec3db6b2cb0c9a40","after":"cfa44384431059d176e9eacc2f1054a25d272994","ref":"refs/heads/develop","pushedAt":"2024-06-22T14:32:23.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"IAlibay","name":"Irfan Alibay","path":"/IAlibay","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12460125?s=80&v=4"},"commit":{"message":"BLD: NumPy 2 compat for wheel builds (#4620)\n\n* BLD: NumPy 2 compat for wheel builds\r\n\r\n* Fixes #4619\r\n\r\n* We should build against NumPy `2.0.0` so that we're backwards\r\ncompatible to NumPy `1.x` while still supporting 2.x series. This\r\nis simpler to maintain as well. In theory, should support\r\nas far back as NumPy `1.19` if we needed it.\r\n\r\n* MAINT, TST: PR 4620 revisions\r\n\r\n* Add NumPy 2-related shims aimed at avoiding\r\ncontrol flow that hits `RDKit` or `parmed`, until\r\nthey have releases supporting NumPy 2. This mostly\r\nmeans skipping a bunch of tests that use those\r\npackages for now.\r\n\r\n* Update ParmEd.py\r\n\r\n* Update CHANGELOG\r\n\r\n* Update ParmEd.py\r\n\r\n---------\r\n\r\nCo-authored-by: Irfan Alibay ","shortMessageHtmlLink":"BLD: NumPy 2 compat for wheel builds (#4620)"}},{"before":"a9f6a90391bfb7eef3d22ab0eb31dc0eae4926b5","after":"8a64999364de3a936c9bf1e7f262f3b85a9122b1","ref":"refs/heads/gh-pages","pushedAt":"2024-06-22T13:24:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"rebuilt html docs for version 2.8.0-dev0 from branch develop with sphinx at 8dae855","shortMessageHtmlLink":"rebuilt html docs for version 2.8.0-dev0 from branch develop with sph…"}},{"before":"0a9d5d5716ab0899d7a8f14b9e66c09f3136868d","after":null,"ref":"refs/heads/dependabot/github_actions/github-actions-2958043eb2","pushedAt":"2024-06-22T13:21:34.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"IAlibay","name":"Irfan Alibay","path":"/IAlibay","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12460125?s=80&v=4"}},{"before":"ac07f005d887975b3b832d8c2dab3b20d45a858a","after":"8dae8559e73e3822082f67cfec3db6b2cb0c9a40","ref":"refs/heads/develop","pushedAt":"2024-06-22T13:21:29.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"IAlibay","name":"Irfan Alibay","path":"/IAlibay","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12460125?s=80&v=4"},"commit":{"message":"Bump the github-actions group across 1 directory with 8 updates (#4623)\n\nBumps the github-actions group with 8 updates in the / directory:\r\n\r\n| Package | From | To |\r\n| --- | --- | --- |\r\n| [actions/setup-python](https://github.com/actions/setup-python) | `4` | `5` |\r\n| [actions/github-script](https://github.com/actions/github-script) | `6` | `7` |\r\n| [actions/upload-artifact](https://github.com/actions/upload-artifact) | `3` | `4` |\r\n| [actions/download-artifact](https://github.com/actions/download-artifact) | `3` | `4` |\r\n| [pypa/gh-action-pypi-publish](https://github.com/pypa/gh-action-pypi-publish) | `1.8.10` | `1.9.0` |\r\n| [codecov/codecov-action](https://github.com/codecov/codecov-action) | `3` | `4` |\r\n| [actions/labeler](https://github.com/actions/labeler) | `3` | `5` |\r\n| [akaihola/darker](https://github.com/akaihola/darker) | `1.6.1` | `2.1.1` |\r\n\r\n\r\n\r\nUpdates `actions/setup-python` from 4 to 5\r\n- [Release notes](https://github.com/actions/setup-python/releases)\r\n- [Commits](https://github.com/actions/setup-python/compare/v4...v5)\r\n\r\nUpdates `actions/github-script` from 6 to 7\r\n- [Release notes](https://github.com/actions/github-script/releases)\r\n- [Commits](https://github.com/actions/github-script/compare/v6...v7)\r\n\r\nUpdates `actions/upload-artifact` from 3 to 4\r\n- [Release notes](https://github.com/actions/upload-artifact/releases)\r\n- [Commits](https://github.com/actions/upload-artifact/compare/v3...v4)\r\n\r\nUpdates `actions/download-artifact` from 3 to 4\r\n- [Release notes](https://github.com/actions/download-artifact/releases)\r\n- [Commits](https://github.com/actions/download-artifact/compare/v3...v4)\r\n\r\nUpdates `pypa/gh-action-pypi-publish` from 1.8.10 to 1.9.0\r\n- [Release notes](https://github.com/pypa/gh-action-pypi-publish/releases)\r\n- [Commits](https://github.com/pypa/gh-action-pypi-publish/compare/v1.8.10...v1.9.0)\r\n\r\nUpdates `codecov/codecov-action` from 3 to 4\r\n- [Release notes](https://github.com/codecov/codecov-action/releases)\r\n- [Changelog](https://github.com/codecov/codecov-action/blob/main/CHANGELOG.md)\r\n- [Commits](https://github.com/codecov/codecov-action/compare/v3...v4)\r\n\r\nUpdates `actions/labeler` from 3 to 5\r\n- [Release notes](https://github.com/actions/labeler/releases)\r\n- [Commits](https://github.com/actions/labeler/compare/v3...v5)\r\n\r\nUpdates `akaihola/darker` from 1.6.1 to 2.1.1\r\n- [Release notes](https://github.com/akaihola/darker/releases)\r\n- [Changelog](https://github.com/akaihola/darker/blob/master/CHANGES.rst)\r\n- [Commits](https://github.com/akaihola/darker/compare/1.6.1...v2.1.1)\r\n\r\n---\r\nupdated-dependencies:\r\n- dependency-name: actions/setup-python\r\n dependency-type: direct:production\r\n update-type: version-update:semver-major\r\n dependency-group: github-actions\r\n- dependency-name: actions/github-script\r\n dependency-type: direct:production\r\n update-type: version-update:semver-major\r\n dependency-group: github-actions\r\n- dependency-name: actions/upload-artifact\r\n dependency-type: direct:production\r\n update-type: version-update:semver-major\r\n dependency-group: github-actions\r\n- dependency-name: actions/download-artifact\r\n dependency-type: direct:production\r\n update-type: version-update:semver-major\r\n dependency-group: github-actions\r\n- dependency-name: pypa/gh-action-pypi-publish\r\n dependency-type: direct:production\r\n update-type: version-update:semver-minor\r\n dependency-group: github-actions\r\n- dependency-name: codecov/codecov-action\r\n dependency-type: direct:production\r\n update-type: version-update:semver-major\r\n dependency-group: github-actions\r\n- dependency-name: actions/labeler\r\n dependency-type: direct:production\r\n update-type: version-update:semver-major\r\n dependency-group: github-actions\r\n- dependency-name: akaihola/darker\r\n dependency-type: direct:production\r\n update-type: version-update:semver-major\r\n dependency-group: github-actions\r\n...\r\n\r\nSigned-off-by: dependabot[bot] \r\nCo-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>","shortMessageHtmlLink":"Bump the github-actions group across 1 directory with 8 updates (#4623)"}},{"before":null,"after":"0a9d5d5716ab0899d7a8f14b9e66c09f3136868d","ref":"refs/heads/dependabot/github_actions/github-actions-2958043eb2","pushedAt":"2024-06-19T20:13:04.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"dependabot[bot]","name":null,"path":"/apps/dependabot","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/29110?s=80&v=4"},"commit":{"message":"Bump the github-actions group across 1 directory with 8 updates\n\nBumps the github-actions group with 8 updates in the / directory:\n\n| Package | From | To |\n| --- | --- | --- |\n| [actions/setup-python](https://github.com/actions/setup-python) | `4` | `5` |\n| [actions/github-script](https://github.com/actions/github-script) | `6` | `7` |\n| [actions/upload-artifact](https://github.com/actions/upload-artifact) | `3` | `4` |\n| [actions/download-artifact](https://github.com/actions/download-artifact) | `3` | `4` |\n| [pypa/gh-action-pypi-publish](https://github.com/pypa/gh-action-pypi-publish) | `1.8.10` | `1.9.0` |\n| [codecov/codecov-action](https://github.com/codecov/codecov-action) | `3` | `4` |\n| [actions/labeler](https://github.com/actions/labeler) | `3` | `5` |\n| [akaihola/darker](https://github.com/akaihola/darker) | `1.6.1` | `2.1.1` |\n\n\n\nUpdates `actions/setup-python` from 4 to 5\n- [Release notes](https://github.com/actions/setup-python/releases)\n- [Commits](https://github.com/actions/setup-python/compare/v4...v5)\n\nUpdates `actions/github-script` from 6 to 7\n- [Release notes](https://github.com/actions/github-script/releases)\n- [Commits](https://github.com/actions/github-script/compare/v6...v7)\n\nUpdates `actions/upload-artifact` from 3 to 4\n- [Release notes](https://github.com/actions/upload-artifact/releases)\n- [Commits](https://github.com/actions/upload-artifact/compare/v3...v4)\n\nUpdates `actions/download-artifact` from 3 to 4\n- [Release notes](https://github.com/actions/download-artifact/releases)\n- [Commits](https://github.com/actions/download-artifact/compare/v3...v4)\n\nUpdates `pypa/gh-action-pypi-publish` from 1.8.10 to 1.9.0\n- [Release notes](https://github.com/pypa/gh-action-pypi-publish/releases)\n- [Commits](https://github.com/pypa/gh-action-pypi-publish/compare/v1.8.10...v1.9.0)\n\nUpdates `codecov/codecov-action` from 3 to 4\n- [Release notes](https://github.com/codecov/codecov-action/releases)\n- [Changelog](https://github.com/codecov/codecov-action/blob/main/CHANGELOG.md)\n- [Commits](https://github.com/codecov/codecov-action/compare/v3...v4)\n\nUpdates `actions/labeler` from 3 to 5\n- [Release notes](https://github.com/actions/labeler/releases)\n- [Commits](https://github.com/actions/labeler/compare/v3...v5)\n\nUpdates `akaihola/darker` from 1.6.1 to 2.1.1\n- [Release notes](https://github.com/akaihola/darker/releases)\n- [Changelog](https://github.com/akaihola/darker/blob/master/CHANGES.rst)\n- [Commits](https://github.com/akaihola/darker/compare/1.6.1...v2.1.1)\n\n---\nupdated-dependencies:\n- dependency-name: actions/setup-python\n dependency-type: direct:production\n update-type: version-update:semver-major\n dependency-group: github-actions\n- dependency-name: actions/github-script\n dependency-type: direct:production\n update-type: version-update:semver-major\n dependency-group: github-actions\n- dependency-name: actions/upload-artifact\n dependency-type: direct:production\n update-type: version-update:semver-major\n dependency-group: github-actions\n- dependency-name: actions/download-artifact\n dependency-type: direct:production\n update-type: version-update:semver-major\n dependency-group: github-actions\n- dependency-name: pypa/gh-action-pypi-publish\n dependency-type: direct:production\n update-type: version-update:semver-minor\n dependency-group: github-actions\n- dependency-name: codecov/codecov-action\n dependency-type: direct:production\n update-type: version-update:semver-major\n dependency-group: github-actions\n- dependency-name: actions/labeler\n dependency-type: direct:production\n update-type: version-update:semver-major\n dependency-group: github-actions\n- dependency-name: akaihola/darker\n dependency-type: direct:production\n update-type: version-update:semver-major\n dependency-group: github-actions\n...\n\nSigned-off-by: dependabot[bot] ","shortMessageHtmlLink":"Bump the github-actions group across 1 directory with 8 updates"}},{"before":"ec60695a5354cbfc350cd0bc0fd88d6ac01f21b4","after":null,"ref":"refs/heads/dependabot/github_actions/github-actions-2527952810","pushedAt":"2024-06-19T20:12:49.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"dependabot[bot]","name":null,"path":"/apps/dependabot","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/29110?s=80&v=4"}},{"before":"28a0af4fcf474ed6d63fca2ec2050ee0447a1706","after":"a9f6a90391bfb7eef3d22ab0eb31dc0eae4926b5","ref":"refs/heads/gh-pages","pushedAt":"2024-06-18T22:53:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"rebuilt html docs for version 2.8.0-dev0 from branch develop with sphinx at ac07f00","shortMessageHtmlLink":"rebuilt html docs for version 2.8.0-dev0 from branch develop with sph…"}},{"before":null,"after":"ec60695a5354cbfc350cd0bc0fd88d6ac01f21b4","ref":"refs/heads/dependabot/github_actions/github-actions-2527952810","pushedAt":"2024-06-18T22:51:53.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"dependabot[bot]","name":null,"path":"/apps/dependabot","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/29110?s=80&v=4"},"commit":{"message":"Bump the github-actions group with 9 updates\n\nBumps the github-actions group with 9 updates:\n\n| Package | From | To |\n| --- | --- | --- |\n| [actions/setup-python](https://github.com/actions/setup-python) | `4` | `5` |\n| [actions/github-script](https://github.com/actions/github-script) | `6` | `7` |\n| [pypa/cibuildwheel](https://github.com/pypa/cibuildwheel) | `2.16.5` | `2.19.1` |\n| [actions/upload-artifact](https://github.com/actions/upload-artifact) | `3` | `4` |\n| [actions/download-artifact](https://github.com/actions/download-artifact) | `3` | `4` |\n| [pypa/gh-action-pypi-publish](https://github.com/pypa/gh-action-pypi-publish) | `1.8.10` | `1.9.0` |\n| [codecov/codecov-action](https://github.com/codecov/codecov-action) | `3` | `4` |\n| [actions/labeler](https://github.com/actions/labeler) | `3` | `5` |\n| [akaihola/darker](https://github.com/akaihola/darker) | `1.6.1` | `2.1.1` |\n\n\nUpdates `actions/setup-python` from 4 to 5\n- [Release notes](https://github.com/actions/setup-python/releases)\n- [Commits](https://github.com/actions/setup-python/compare/v4...v5)\n\nUpdates `actions/github-script` from 6 to 7\n- [Release notes](https://github.com/actions/github-script/releases)\n- [Commits](https://github.com/actions/github-script/compare/v6...v7)\n\nUpdates `pypa/cibuildwheel` from 2.16.5 to 2.19.1\n- [Release notes](https://github.com/pypa/cibuildwheel/releases)\n- [Changelog](https://github.com/pypa/cibuildwheel/blob/main/docs/changelog.md)\n- [Commits](https://github.com/pypa/cibuildwheel/compare/v2.16.5...v2.19.1)\n\nUpdates `actions/upload-artifact` from 3 to 4\n- [Release notes](https://github.com/actions/upload-artifact/releases)\n- [Commits](https://github.com/actions/upload-artifact/compare/v3...v4)\n\nUpdates `actions/download-artifact` from 3 to 4\n- [Release notes](https://github.com/actions/download-artifact/releases)\n- [Commits](https://github.com/actions/download-artifact/compare/v3...v4)\n\nUpdates `pypa/gh-action-pypi-publish` from 1.8.10 to 1.9.0\n- [Release notes](https://github.com/pypa/gh-action-pypi-publish/releases)\n- [Commits](https://github.com/pypa/gh-action-pypi-publish/compare/v1.8.10...v1.9.0)\n\nUpdates `codecov/codecov-action` from 3 to 4\n- [Release notes](https://github.com/codecov/codecov-action/releases)\n- [Changelog](https://github.com/codecov/codecov-action/blob/main/CHANGELOG.md)\n- [Commits](https://github.com/codecov/codecov-action/compare/v3...v4)\n\nUpdates `actions/labeler` from 3 to 5\n- [Release notes](https://github.com/actions/labeler/releases)\n- [Commits](https://github.com/actions/labeler/compare/v3...v5)\n\nUpdates `akaihola/darker` from 1.6.1 to 2.1.1\n- [Release notes](https://github.com/akaihola/darker/releases)\n- [Changelog](https://github.com/akaihola/darker/blob/master/CHANGES.rst)\n- [Commits](https://github.com/akaihola/darker/compare/1.6.1...v2.1.1)\n\n---\nupdated-dependencies:\n- dependency-name: actions/setup-python\n dependency-type: direct:production\n update-type: version-update:semver-major\n dependency-group: github-actions\n- dependency-name: actions/github-script\n dependency-type: direct:production\n update-type: version-update:semver-major\n dependency-group: github-actions\n- dependency-name: pypa/cibuildwheel\n dependency-type: direct:production\n update-type: version-update:semver-minor\n dependency-group: github-actions\n- dependency-name: actions/upload-artifact\n dependency-type: direct:production\n update-type: version-update:semver-major\n dependency-group: github-actions\n- dependency-name: actions/download-artifact\n dependency-type: direct:production\n update-type: version-update:semver-major\n dependency-group: github-actions\n- dependency-name: pypa/gh-action-pypi-publish\n dependency-type: direct:production\n update-type: version-update:semver-minor\n dependency-group: github-actions\n- dependency-name: codecov/codecov-action\n dependency-type: direct:production\n update-type: version-update:semver-major\n dependency-group: github-actions\n- dependency-name: actions/labeler\n dependency-type: direct:production\n update-type: version-update:semver-major\n dependency-group: github-actions\n- dependency-name: akaihola/darker\n dependency-type: direct:production\n update-type: version-update:semver-major\n dependency-group: github-actions\n...\n\nSigned-off-by: dependabot[bot] ","shortMessageHtmlLink":"Bump the github-actions group with 9 updates"}},{"before":"d2d9d2778f3c7e39e5449a08d62b44247ecd080c","after":"ac07f005d887975b3b832d8c2dab3b20d45a858a","ref":"refs/heads/develop","pushedAt":"2024-06-18T22:50:34.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"hmacdope","name":"Hugo MacDermott-Opeskin","path":"/hmacdope","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24581003?s=80&v=4"},"commit":{"message":"Add a Dependabot config to auto-update GitHub action versions (#4618)\n\n* Add a Dependabot config to auto-update GitHub action versions\r\n\r\nSigned-off-by: Kurt McKee \r\n\r\n* Feedback: Update AUTHORS file\r\n\r\n---------\r\n\r\nSigned-off-by: Kurt McKee ","shortMessageHtmlLink":"Add a Dependabot config to auto-update GitHub action versions (#4618)"}},{"before":"d95f5a7b3d07bfe6e4b14e50bf8449886dcf762a","after":"28a0af4fcf474ed6d63fca2ec2050ee0447a1706","ref":"refs/heads/gh-pages","pushedAt":"2024-06-18T08:06:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"rebuilt html docs for version 2.8.0-dev0 from branch develop with sphinx at d2d9d27","shortMessageHtmlLink":"rebuilt html docs for version 2.8.0-dev0 from branch develop with sph…"}},{"before":"347a0c0d31ee850d5a41bad5a49803bc9795f580","after":"d2d9d2778f3c7e39e5449a08d62b44247ecd080c","ref":"refs/heads/develop","pushedAt":"2024-06-18T08:03:28.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"orbeckst","name":"Oliver Beckstein","path":"/orbeckst","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/237980?s=80&v=4"},"commit":{"message":"add dssp analysis (PR #4304)\n\n- Fixes #1612\r\n- add `MDAnalysis.analysis.dssp` module with the `DSSP` class for secondary structure analysis, using code implemented in pydssp package available for secondary structure annotation; source *pydssp* v.0.9.0 (https://github.com/ShintaroMinami/PyDSSP) by Shintaro Minami, distributed under MIT license.\r\n- include modified pydssp_numpy.py where einops was removed as a dependency and replaced with pure numpy operations\r\n- adds tests from pydssp package and many test files\r\n- add additional tests \r\n- add docs\r\n- update CHANGELOG\r\n- Add entry for pydssp in LICENSE\r\n\r\n---------\r\n\r\nCo-authored-by: Oliver Beckstein \r\nCo-authored-by: Yuxuan Zhuang ","shortMessageHtmlLink":"add dssp analysis (PR #4304)"}},{"before":"6b75bf632f989e50f715aa76410c1bc0b5002c4b","after":"d95f5a7b3d07bfe6e4b14e50bf8449886dcf762a","ref":"refs/heads/gh-pages","pushedAt":"2024-05-31T01:11:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"rebuilt html docs for version 2.8.0-dev0 from branch develop with sphinx at 347a0c0","shortMessageHtmlLink":"rebuilt html docs for version 2.8.0-dev0 from branch develop with sph…"}},{"before":"81062f370305226592afdbc9a2b60f671b2652c5","after":"347a0c0d31ee850d5a41bad5a49803bc9795f580","ref":"refs/heads/develop","pushedAt":"2024-05-31T01:08:15.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"hmacdope","name":"Hugo MacDermott-Opeskin","path":"/hmacdope","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24581003?s=80&v=4"},"commit":{"message":"PSFParser reads and converts string-Like residue number to the leading number (#4582)\n\n* psf support string like resid\r\n\r\n* add psf file with insertion code\r\n\r\n* add changelog\r\n\r\n* update doc and pep8\r\n\r\n* add test for psf","shortMessageHtmlLink":"PSFParser reads and converts string-Like residue number to the leadin…"}},{"before":"86b21292fb3325f59c276763c68352d2cf0b1141","after":"6b75bf632f989e50f715aa76410c1bc0b5002c4b","ref":"refs/heads/gh-pages","pushedAt":"2024-05-26T22:51:26.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"rebuilt html docs for version 2.8.0-dev0 from branch develop with sphinx at 81062f3","shortMessageHtmlLink":"rebuilt html docs for version 2.8.0-dev0 from branch develop with sph…"}},{"before":"2c6e21f72187be29c1e406045560f4d88ba6860f","after":"81062f370305226592afdbc9a2b60f671b2652c5","ref":"refs/heads/develop","pushedAt":"2024-05-26T22:48:10.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"hmacdope","name":"Hugo MacDermott-Opeskin","path":"/hmacdope","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24581003?s=80&v=4"},"commit":{"message":"AlignTraj Writer kwargs fix (#4565)\n\n* kwarg fix and test\r\n\r\n* refactor test\r\n\r\n* pep8, docs, changelog\r\n\r\n* CHANGELOG, dict added\r\n\r\n* versionchanged\r\n\r\n* undo black\r\n\r\n---------\r\n\r\nCo-authored-by: Hugo MacDermott-Opeskin ","shortMessageHtmlLink":"AlignTraj Writer kwargs fix (#4565)"}},{"before":"3063a601d4aca48d544c0e2dcb43c37af93e342d","after":"86b21292fb3325f59c276763c68352d2cf0b1141","ref":"refs/heads/gh-pages","pushedAt":"2024-05-24T00:19:12.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"rebuilt html docs for version 2.8.0-dev0 from branch develop with sphinx at 2c6e21f","shortMessageHtmlLink":"rebuilt html docs for version 2.8.0-dev0 from branch develop with sph…"}},{"before":"0f04e3e48960b8c43205d9e821a05a097eddfee3","after":"2c6e21f72187be29c1e406045560f4d88ba6860f","ref":"refs/heads/develop","pushedAt":"2024-05-24T00:15:49.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"orbeckst","name":"Oliver Beckstein","path":"/orbeckst","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/237980?s=80&v=4"},"commit":{"message":"Remove default parallelizable parameter in NoJump transformation (#4604)\n\n* Fixes #4259\r\n* Remove parallelizable parameter in NoJump transformation (and always set it to False because\r\n the transformation is inherently not parallelizable with split-apply-combine)\r\n* update CHANGELOG","shortMessageHtmlLink":"Remove default parallelizable parameter in NoJump transformation (#4604)"}},{"before":"a8314bfc960afc27c61f1f2b13a23b8ecc0a637a","after":"3063a601d4aca48d544c0e2dcb43c37af93e342d","ref":"refs/heads/gh-pages","pushedAt":"2024-05-08T13:04:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"rebuilt html docs for version 2.8.0-dev0 from branch develop with sphinx at 0f04e3e","shortMessageHtmlLink":"rebuilt html docs for version 2.8.0-dev0 from branch develop with sph…"}},{"before":"45fb664a4e053772c3d5cf541b2705e270a7f2a6","after":"0f04e3e48960b8c43205d9e821a05a097eddfee3","ref":"refs/heads/develop","pushedAt":"2024-05-08T13:00:56.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"hmacdope","name":"Hugo MacDermott-Opeskin","path":"/hmacdope","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24581003?s=80&v=4"},"commit":{"message":"[doc] fix RDF equation (and hole link) (#4591)\n\n* [docs] fix normalization in g_ab() RDF equation\r\n\r\n- doc fix\r\n- see https://github.com/MDAnalysis/mdanalysis/discussions/4437#discussioncomment-9027091 (originally found by @rodpollet)\r\n\r\n* [doc] fix missing HOLE link","shortMessageHtmlLink":"[doc] fix RDF equation (and hole link) (#4591)"}},{"before":null,"after":"61d05a99cee7ea36e4dfcb27c1554ecfa7eb6c19","ref":"refs/heads/fix-rdf-equation","pushedAt":"2024-05-07T22:42:45.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"orbeckst","name":"Oliver Beckstein","path":"/orbeckst","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/237980?s=80&v=4"},"commit":{"message":"[doc] fix missing HOLE link","shortMessageHtmlLink":"[doc] fix missing HOLE link"}},{"before":"ab394a49e305549e1ead392aa85b9af7c897791e","after":null,"ref":"refs/heads/new_conftest","pushedAt":"2024-05-01T02:54:39.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"yuxuanzhuang","name":"Yuxuan Zhuang","path":"/yuxuanzhuang","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24636656?s=80&v=4"}},{"before":null,"after":"ab394a49e305549e1ead392aa85b9af7c897791e","ref":"refs/heads/new_conftest","pushedAt":"2024-05-01T02:53:19.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"yuxuanzhuang","name":"Yuxuan Zhuang","path":"/yuxuanzhuang","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24636656?s=80&v=4"},"commit":{"message":"Merge branch 'develop' into feature/dask-0","shortMessageHtmlLink":"Merge branch 'develop' into feature/dask-0"}},{"before":"d91a1083614c0f8af34132bac0e9579c0a7fa016","after":"4977f2e5a79066c7bbd9c6a7d20e65708ab342ad","ref":"refs/heads/fix-ci-deps","pushedAt":"2024-04-28T20:37:34.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"IAlibay","name":"Irfan Alibay","path":"/IAlibay","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12460125?s=80&v=4"},"commit":{"message":"explicitly do a nodeps build of mdakits","shortMessageHtmlLink":"explicitly do a nodeps build of mdakits"}},{"before":"5b475480a689ed079ee22a5eb57a464d13fac113","after":"d91a1083614c0f8af34132bac0e9579c0a7fa016","ref":"refs/heads/fix-ci-deps","pushedAt":"2024-04-28T20:25:42.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"IAlibay","name":"Irfan Alibay","path":"/IAlibay","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12460125?s=80&v=4"},"commit":{"message":"Merge branch 'develop' into fix-ci-deps","shortMessageHtmlLink":"Merge branch 'develop' into fix-ci-deps"}},{"before":"31b9ced8dcc11045afc37b16e746aa0c85c54360","after":"5b475480a689ed079ee22a5eb57a464d13fac113","ref":"refs/heads/fix-ci-deps","pushedAt":"2024-04-28T20:25:21.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"IAlibay","name":"Irfan Alibay","path":"/IAlibay","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12460125?s=80&v=4"},"commit":{"message":"revert action change","shortMessageHtmlLink":"revert action change"}},{"before":"44291d573316ab9091a95051648fc06129eb1806","after":null,"ref":"refs/heads/fix-mypy","pushedAt":"2024-04-28T20:22:27.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"IAlibay","name":"Irfan Alibay","path":"/IAlibay","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12460125?s=80&v=4"}},{"before":"15ec9cb3f1a24f0c901591a33562ff6918a35c7f","after":null,"ref":"refs/heads/fix-discovery","pushedAt":"2024-04-28T20:22:02.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"IAlibay","name":"Irfan Alibay","path":"/IAlibay","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/12460125?s=80&v=4"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEds6eZwA","startCursor":null,"endCursor":null}},"title":"Activity · MDAnalysis/mdanalysis"}