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<script src="https://cdn.jsdelivr.net/npm/vsm-dictionary-complex-portal@^1.0.1/dist/vsm-dictionary-complex-portal.min.js"></script> <script src="https://cdn.jsdelivr.net/npm/vsm-dictionary-ensembl-genomes@^1.0.2/dist/vsm-dictionary-ensembl-genomes.min.js"></script> <script src="https://cdn.jsdelivr.net/npm/vsm-dictionary-ensembl@^1.0.3/dist/vsm-dictionary-ensembl.min.js"></script> <script src="https://cdn.jsdelivr.net/npm/vsm-dictionary-rnacentral@^1.0.1/dist/vsm-dictionary-rnacentral.min.js"></script> <script src="https://cdn.jsdelivr.net/npm/vsm-dictionary-uniprot@^1.0.5/dist/vsm-dictionary-uniprot.min.js"></script> <script src="https://cdn.jsdelivr.net/npm/vsm-dictionary-bioportal@^1.2.0/dist/vsm-dictionary-bioportal.min.js"></script> <script src="https://cdn.jsdelivr.net/npm/vsm-dictionary-pubmed@^1.0.0/dist/vsm-dictionary-pubmed.min.js"></script> <script src="https://cdn.jsdelivr.net/npm/vsm-dictionary-cacher@^1.2.1/dist/vsm-dictionary-cacher.min.js"></script> <script src="https://cdn.jsdelivr.net/npm/vsm-dictionary-combiner@^1.0.1/dist/vsm-dictionary-combiner.min.js"></script> <script src="https://cdn.jsdelivr.net/npm/vsm-box@^1.0.0/dist/vsm-box.standalone.min.js"></script> <script type="text/javascript" src="https://code.jquery.com/jquery-1.7.1.min.js"></script> <script src="https://www.jqueryscript.net/demo/jQuery-Plugin-For-Multi-Select-List-with-Checkboxes-MultiSelect/jquery.multiselect.js"></script> <script src="https://cdn.jsdelivr.net/npm/converter-causal-formats@^1.0.2/dist/converter-causal-formats.min.js"></script> <script src="https://cdn.jsdelivr.net/npm/vsm-json-pretty@^1.0.0/dist/vsm-json-pretty.min.js"></script> <script src="js/VsmCausalTemplate.js"></script> <script src="js/ExportCausalJson.js"></script>

1. Select the terms to add in the causal statement

Source entity

UniProt Ensembl Ensembl Genomes RNAcentral ChEBI Complex Portal Gene Ontology
Biological type

Biological activity

Biological modification

Taxon

Compartment

Experimental setup


Target entity

UniProt Ensembl Ensembl Genomes RNAcentral ChEBI Complex Portal Gene Ontology
Biological type

Biological activity

Biological modification

Taxon

Compartment

Experimental setup


Causal relationship

Biological mechanism

Taxon

Compartment

Cell type or cell line

Tissue type

Causal statement

Reference(s)


Evidence
<script> $('select[multiple]').multiselect({ columns: 1, placeholder: 'Select database(s)' }); $('#source_db').on('change',function() { updateEntityDatabase($(this).val(), "source"); }); $('#target_db').on('change',function() { updateEntityDatabase($(this).val(), "target"); }); </script>

2. Fill the vsm-box


3. Download the causal statement

VSM-JSON-light causal-JSON MITAB2.8