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Empty memory option in profiles.txt #88

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raul-delacruz opened this issue Aug 20, 2018 · 0 comments
Open

Empty memory option in profiles.txt #88

raul-delacruz opened this issue Aug 20, 2018 · 0 comments

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@raul-delacruz
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Hi,

I am trying to use fyrd on a supercomputer with SLURM queue system but the 'mem' option is giving me problems. The point is that in our SLURM the option #SBATCH --mem=XXX is not allowed:

20180820 16:39:56.517 | CRITICAL --> sbatch failed with code 1
-----------------------------------> stdout: 
-----------------------------------> stderr: sbatch: error: You cannot submit a job requesting memory parameters, memory is automatically set for each asked cpu (2G/core by default, 8G/core for highmem)
-----------------------------------> sbatch: error: Batch job submission failed: Memory required by task is not available

This parameter is already fixed by the class/partition and it is not permitted.
Leaving the value as none or empty in the profiles.txt does not help either, it seems that is mandatory to set a value for it. Could you leave this parameter as optional?

Thanks in advance,
Raúl

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