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Need to adjust memory allocation for jobs #37

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stevekm opened this issue Oct 21, 2019 · 0 comments
Open

Need to adjust memory allocation for jobs #37

stevekm opened this issue Oct 21, 2019 · 0 comments
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enhancement New feature or request

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@stevekm
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stevekm commented Oct 21, 2019

Default memory allocation for many SLURM jobs on NYU Big Purple HPC was recently reduced to 4GB. However, Nextflow reports suggest that for many jobs, this could be reduced further, which might help to increase job throughput.

Screen Shot 2019-10-21 at 1 21 25 PM

Screen Shot 2019-10-21 at 1 21 05 PM

Need to run some more evaluations of total memory usage for jobs and try to find parameters closer to memory minimum required for most jobs using typical datasets.

@stevekm stevekm added the enhancement New feature or request label Oct 21, 2019
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