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master_list.txt
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master_list.txt
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1 @RG\tID:TP1\tLB:Lib_1_tumor\tSM:MBRep_T71_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031467_TARGET_EXOME_tumor_MBRep_T71_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031467_TARGET_EXOME_tumor_MBRep_T71_merged_targetExtract.rmdup.bam.fastq.gz
2 @RG\tID:TP2\tLB:Lib_2_tumor\tSM:MBRep_T47_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031468_TARGET_EXOME_tumor_MBRep_T47_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031468_TARGET_EXOME_tumor_MBRep_T47_merged_targetExtract.rmdup.bam.fastq.gz
3 @RG\tID:TP3\tLB:Lib_3_control\tSM:MBRep_T67_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031469_TARGET_EXOME_control_MBRep_T67_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031469_TARGET_EXOME_control_MBRep_T67_merged_targetExtract.rmdup.bam.fastq.gz
4 @RG\tID:TP4\tLB:Lib_4_tumor\tSM:MBRep_T23_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031470_TARGET_EXOME_tumor_MBRep_T23_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031470_TARGET_EXOME_tumor_MBRep_T23_merged_targetExtract.rmdup.bam.fastq.gz
5 @RG\tID:TP5\tLB:Lib_5_tumor\tSM:MBRep_T2tumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031471_TARGET_EXOME_tumor_MBRep_T2_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031471_TARGET_EXOME_tumor_MBRep_T2_targetExtract.rmdup.bam.fastq.gz
6 @RG\tID:TP6\tLB:Lib_6_control\tSM:MBRep_T10control\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031472_TARGET_EXOME_control_MBRep_T10_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031472_TARGET_EXOME_control_MBRep_T10_targetExtract.rmdup.bam.fastq.gz
7 @RG\tID:TP7\tLB:Lib_7_control\tSM:MBRep_T62_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031473_TARGET_EXOME_control_MBRep_T62_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031473_TARGET_EXOME_control_MBRep_T62_merged_targetExtract.rmdup.bam.fastq.gz
8 @RG\tID:TP8\tLB:Lib_8_tumor\tSM:MBRep_T30_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031474_TARGET_EXOME_tumor_MBRep_T30_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031474_TARGET_EXOME_tumor_MBRep_T30_merged_targetExtract.rmdup.bam.fastq.gz
9 @RG\tID:TP9\tLB:Lib_9_control\tSM:MBRep_T32_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031475_TARGET_EXOME_control_MBRep_T32_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031475_TARGET_EXOME_control_MBRep_T32_merged_targetExtract.rmdup.bam.fastq.gz
10 @RG\tID:TP10\tLB:Lib_10_tumor\tSM:MBRep_T40_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031476_TARGET_EXOME_tumor_MBRep_T40_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031476_TARGET_EXOME_tumor_MBRep_T40_merged_targetExtract.rmdup.bam.fastq.gz
11 @RG\tID:TP11\tLB:Lib_11_tumor\tSM:MBRep_T86_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031477_TARGET_EXOME_tumor_MBRep_T86_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031477_TARGET_EXOME_tumor_MBRep_T86_merged_targetExtract.rmdup.bam.fastq.gz
12 @RG\tID:TP12\tLB:Lib_12_tumor\tSM:MBRep_T10tumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031478_TARGET_EXOME_tumor_MBRep_T10_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031478_TARGET_EXOME_tumor_MBRep_T10_targetExtract.rmdup.bam.fastq.gz
13 @RG\tID:TP13\tLB:Lib_13_control\tSM:MBRep_T1control\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031479_TARGET_EXOME_control_MBRep_T1_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031479_TARGET_EXOME_control_MBRep_T1_targetExtract.rmdup.bam.fastq.gz
14 @RG\tID:TP14\tLB:Lib_14_control\tSM:MBRep_T79_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031480_TARGET_EXOME_control_MBRep_T79_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031480_TARGET_EXOME_control_MBRep_T79_merged_targetExtract.rmdup.bam.fastq.gz
15 @RG\tID:TP15\tLB:Lib_15_tumor\tSM:MBRep_T83_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031481_TARGET_EXOME_tumor_MBRep_T83_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031481_TARGET_EXOME_tumor_MBRep_T83_merged_targetExtract.rmdup.bam.fastq.gz
16 @RG\tID:TP16\tLB:Lib_16_tumor\tSM:MBRep_T33_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031482_TARGET_EXOME_tumor_MBRep_T33_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031482_TARGET_EXOME_tumor_MBRep_T33_merged_targetExtract.rmdup.bam.fastq.gz
17 @RG\tID:TP17\tLB:Lib_17_tumor\tSM:MBRep_T5tumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031483_TARGET_EXOME_tumor_MBRep_T5_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031483_TARGET_EXOME_tumor_MBRep_T5_targetExtract.rmdup.bam.fastq.gz
18 @RG\tID:TP18\tLB:Lib_18_tumor\tSM:MBRep_T44_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031484_TARGET_EXOME_tumor_MBRep_T44_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031484_TARGET_EXOME_tumor_MBRep_T44_merged_targetExtract.rmdup.bam.fastq.gz
19 @RG\tID:TP19\tLB:Lib_19_control\tSM:MBRep_T43_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031485_TARGET_EXOME_control_MBRep_T43_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031485_TARGET_EXOME_control_MBRep_T43_merged_targetExtract.rmdup.bam.fastq.gz
20 @RG\tID:TP20\tLB:Lib_20_tumor\tSM:MBRep_T28_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031486_TARGET_EXOME_tumor_MBRep_T28_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031486_TARGET_EXOME_tumor_MBRep_T28_merged_targetExtract.rmdup.bam.fastq.gz
21 @RG\tID:TP21\tLB:Lib_21_control\tSM:MBRep_T68_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031487_TARGET_EXOME_control_MBRep_T68_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031487_TARGET_EXOME_control_MBRep_T68_merged_targetExtract.rmdup.bam.fastq.gz
22 @RG\tID:TP22\tLB:Lib_22_control\tSM:MBRep_T66_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031488_TARGET_EXOME_control_MBRep_T66_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031488_TARGET_EXOME_control_MBRep_T66_merged_targetExtract.rmdup.bam.fastq.gz
23 @RG\tID:TP23\tLB:Lib_23_tumor\tSM:MBRep_T36_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031489_TARGET_EXOME_tumor_MBRep_T36_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031489_TARGET_EXOME_tumor_MBRep_T36_merged_targetExtract.rmdup.bam.fastq.gz
24 @RG\tID:TP24\tLB:Lib_24_tumor\tSM:MBRep_T12tumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031490_TARGET_EXOME_tumor_MBRep_T12_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031490_TARGET_EXOME_tumor_MBRep_T12_targetExtract.rmdup.bam.fastq.gz
25 @RG\tID:TP25\tLB:Lib_25_control\tSM:MBRep_T53_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031491_TARGET_EXOME_control_MBRep_T53_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031491_TARGET_EXOME_control_MBRep_T53_merged_targetExtract.rmdup.bam.fastq.gz
26 @RG\tID:TP26\tLB:Lib_26_tumor\tSM:MBRep_T79_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031492_TARGET_EXOME_tumor_MBRep_T79_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031492_TARGET_EXOME_tumor_MBRep_T79_merged_targetExtract.rmdup.bam.fastq.gz
27 @RG\tID:TP27\tLB:Lib_27_tumor\tSM:MBRep_T43_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031493_TARGET_EXOME_tumor_MBRep_T43_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031493_TARGET_EXOME_tumor_MBRep_T43_merged_targetExtract.rmdup.bam.fastq.gz
28 @RG\tID:TP28\tLB:Lib_28_tumor\tSM:MBRep_T67_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031494_TARGET_EXOME_tumor_MBRep_T67_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031494_TARGET_EXOME_tumor_MBRep_T67_merged_targetExtract.rmdup.bam.fastq.gz
29 @RG\tID:TP29\tLB:Lib_29_control\tSM:MBRep_T27_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031495_TARGET_EXOME_control_MBRep_T27_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031495_TARGET_EXOME_control_MBRep_T27_merged_targetExtract.rmdup.bam.fastq.gz
30 @RG\tID:TP30\tLB:Lib_30_tumor\tSM:MBRep_T38_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031496_TARGET_EXOME_tumor_MBRep_T38_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031496_TARGET_EXOME_tumor_MBRep_T38_merged_targetExtract.rmdup.bam.fastq.gz
31 @RG\tID:TP31\tLB:Lib_31_control\tSM:MBRep_T33_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031497_TARGET_EXOME_control_MBRep_T33_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031497_TARGET_EXOME_control_MBRep_T33_merged_targetExtract.rmdup.bam.fastq.gz
32 @RG\tID:TP32\tLB:Lib_32_tumor\tSM:MBRep_T1tumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031498_TARGET_EXOME_tumor_MBRep_T1_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031498_TARGET_EXOME_tumor_MBRep_T1_targetExtract.rmdup.bam.fastq.gz
33 @RG\tID:TP33\tLB:Lib_33_control\tSM:MBRep_T60_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031499_TARGET_EXOME_control_MBRep_T60_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031499_TARGET_EXOME_control_MBRep_T60_merged_targetExtract.rmdup.bam.fastq.gz
34 @RG\tID:TP34\tLB:Lib_34_control\tSM:MBRep_T59_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031500_TARGET_EXOME_control_MBRep_T59_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031500_TARGET_EXOME_control_MBRep_T59_merged_targetExtract.rmdup.bam.fastq.gz
35 @RG\tID:TP35\tLB:Lib_35_tumor\tSM:MBRep_T54_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031501_TARGET_EXOME_tumor_MBRep_T54_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031501_TARGET_EXOME_tumor_MBRep_T54_merged_targetExtract.rmdup.bam.fastq.gz
36 @RG\tID:TP36\tLB:Lib_36_control\tSM:MBRep_T87_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031502_TARGET_EXOME_control_MBRep_T87_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031502_TARGET_EXOME_control_MBRep_T87_merged_targetExtract.rmdup.bam.fastq.gz
37 @RG\tID:TP37\tLB:Lib_37_control\tSM:MBRep_T41_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031503_TARGET_EXOME_control_MBRep_T41_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031503_TARGET_EXOME_control_MBRep_T41_merged_targetExtract.rmdup.bam.fastq.gz
38 @RG\tID:TP38\tLB:Lib_38_control\tSM:MBRep_T24_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031504_TARGET_EXOME_control_MBRep_T24_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031504_TARGET_EXOME_control_MBRep_T24_merged_targetExtract.rmdup.bam.fastq.gz
39 @RG\tID:TP39\tLB:Lib_39_control\tSM:MBRep_T25_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031505_TARGET_EXOME_control_MBRep_T25_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031505_TARGET_EXOME_control_MBRep_T25_merged_targetExtract.rmdup.bam.fastq.gz
40 @RG\tID:TP40\tLB:Lib_40_control\tSM:MBRep_T11control\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031506_TARGET_EXOME_control_MBRep_T11_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031506_TARGET_EXOME_control_MBRep_T11_targetExtract.rmdup.bam.fastq.gz
41 @RG\tID:TP41\tLB:Lib_41_tumor\tSM:MBRep_T85_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031507_TARGET_EXOME_tumor_MBRep_T85_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031507_TARGET_EXOME_tumor_MBRep_T85_merged_targetExtract.rmdup.bam.fastq.gz
42 @RG\tID:TP42\tLB:Lib_42_tumor\tSM:MBRep_T72_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031508_TARGET_EXOME_tumor_MBRep_T72_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031508_TARGET_EXOME_tumor_MBRep_T72_merged_targetExtract.rmdup.bam.fastq.gz
43 @RG\tID:TP43\tLB:Lib_43_tumor\tSM:MBRep_T68_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031509_TARGET_EXOME_tumor_MBRep_T68_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031509_TARGET_EXOME_tumor_MBRep_T68_merged_targetExtract.rmdup.bam.fastq.gz
44 @RG\tID:TP44\tLB:Lib_44_tumor\tSM:MBRep_T6tumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031510_TARGET_EXOME_tumor_MBRep_T6_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031510_TARGET_EXOME_tumor_MBRep_T6_targetExtract.rmdup.bam.fastq.gz
45 @RG\tID:TP45\tLB:Lib_45_tumor\tSM:MBRep_T37_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031511_TARGET_EXOME_tumor_MBRep_T37_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031511_TARGET_EXOME_tumor_MBRep_T37_merged_targetExtract.rmdup.bam.fastq.gz
46 @RG\tID:TP46\tLB:Lib_46_control\tSM:MBRep_T47_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031512_TARGET_EXOME_control_MBRep_T47_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031512_TARGET_EXOME_control_MBRep_T47_merged_targetExtract.rmdup.bam.fastq.gz
47 @RG\tID:TP47\tLB:Lib_47_control\tSM:MBRep_T90_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031513_TARGET_EXOME_control_MBRep_T90_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031513_TARGET_EXOME_control_MBRep_T90_merged_targetExtract.rmdup.bam.fastq.gz
48 @RG\tID:TP48\tLB:Lib_48_tumor\tSM:MBRep_T39_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031514_TARGET_EXOME_tumor_MBRep_T39_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031514_TARGET_EXOME_tumor_MBRep_T39_merged_targetExtract.rmdup.bam.fastq.gz
49 @RG\tID:TP49\tLB:Lib_49_tumor\tSM:MBRep_T88_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031515_TARGET_EXOME_tumor_MBRep_T88_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031515_TARGET_EXOME_tumor_MBRep_T88_merged_targetExtract.rmdup.bam.fastq.gz
50 @RG\tID:TP50\tLB:Lib_50_control\tSM:MBRep_T37_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031516_TARGET_EXOME_control_MBRep_T37_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031516_TARGET_EXOME_control_MBRep_T37_merged_targetExtract.rmdup.bam.fastq.gz
51 @RG\tID:TP51\tLB:Lib_51_control\tSM:MBRep_T73_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031517_TARGET_EXOME_control_MBRep_T73_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031517_TARGET_EXOME_control_MBRep_T73_merged_targetExtract.rmdup.bam.fastq.gz
52 @RG\tID:TP52\tLB:Lib_52_tumor\tSM:MBRep_T62_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031518_TARGET_EXOME_tumor_MBRep_T62_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031518_TARGET_EXOME_tumor_MBRep_T62_merged_targetExtract.rmdup.bam.fastq.gz
53 @RG\tID:TP53\tLB:Lib_53_tumor\tSM:MBRep_T29_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031519_TARGET_EXOME_tumor_MBRep_T29_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031519_TARGET_EXOME_tumor_MBRep_T29_merged_targetExtract.rmdup.bam.fastq.gz
54 @RG\tID:TP54\tLB:Lib_54_tumor\tSM:MBRep_T91_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031520_TARGET_EXOME_tumor_MBRep_T91_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031520_TARGET_EXOME_tumor_MBRep_T91_merged_targetExtract.rmdup.bam.fastq.gz
55 @RG\tID:TP55\tLB:Lib_55_control\tSM:MBRep_T72_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031521_TARGET_EXOME_control_MBRep_T72_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031521_TARGET_EXOME_control_MBRep_T72_merged_targetExtract.rmdup.bam.fastq.gz
56 @RG\tID:TP56\tLB:Lib_56_tumor\tSM:MBRep_T27_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031522_TARGET_EXOME_tumor_MBRep_T27_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031522_TARGET_EXOME_tumor_MBRep_T27_merged_targetExtract.rmdup.bam.fastq.gz
57 @RG\tID:TP57\tLB:Lib_57_control\tSM:MBRep_T35_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031523_TARGET_EXOME_control_MBRep_T35_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031523_TARGET_EXOME_control_MBRep_T35_merged_targetExtract.rmdup.bam.fastq.gz
58 @RG\tID:TP58\tLB:Lib_58_control\tSM:MBRep_T2control\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031524_TARGET_EXOME_control_MBRep_T2_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031524_TARGET_EXOME_control_MBRep_T2_targetExtract.rmdup.bam.fastq.gz
59 @RG\tID:TP59\tLB:Lib_59_tumor\tSM:MBRep_T92_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031525_TARGET_EXOME_tumor_MBRep_T92_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031525_TARGET_EXOME_tumor_MBRep_T92_merged_targetExtract.rmdup.bam.fastq.gz
60 @RG\tID:TP60\tLB:Lib_60_tumor\tSM:MBRep_T25_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031526_TARGET_EXOME_tumor_MBRep_T25_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031526_TARGET_EXOME_tumor_MBRep_T25_merged_targetExtract.rmdup.bam.fastq.gz
61 @RG\tID:TP61\tLB:Lib_61_tumor\tSM:MBRep_T59_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031527_TARGET_EXOME_tumor_MBRep_T59_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031527_TARGET_EXOME_tumor_MBRep_T59_merged_targetExtract.rmdup.bam.fastq.gz
62 @RG\tID:TP62\tLB:Lib_62_tumor\tSM:MBRep_T3tumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031528_TARGET_EXOME_tumor_MBRep_T3_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031528_TARGET_EXOME_tumor_MBRep_T3_targetExtract.rmdup.bam.fastq.gz
63 @RG\tID:TP63\tLB:Lib_63_tumor\tSM:MBRep_T41_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031529_TARGET_EXOME_tumor_MBRep_T41_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031529_TARGET_EXOME_tumor_MBRep_T41_merged_targetExtract.rmdup.bam.fastq.gz
64 @RG\tID:TP64\tLB:Lib_64_tumor\tSM:MBRep_T87_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031530_TARGET_EXOME_tumor_MBRep_T87_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031530_TARGET_EXOME_tumor_MBRep_T87_merged_targetExtract.rmdup.bam.fastq.gz
65 @RG\tID:TP65\tLB:Lib_65_control\tSM:MBRep_T86_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031531_TARGET_EXOME_control_MBRep_T86_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031531_TARGET_EXOME_control_MBRep_T86_merged_targetExtract.rmdup.bam.fastq.gz
66 @RG\tID:TP66\tLB:Lib_66_tumor\tSM:MBRep_T64_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031532_TARGET_EXOME_tumor_MBRep_T64_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031532_TARGET_EXOME_tumor_MBRep_T64_merged_targetExtract.rmdup.bam.fastq.gz
67 @RG\tID:TP67\tLB:Lib_67_control\tSM:MBRep_T22_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031533_TARGET_EXOME_control_MBRep_T22_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031533_TARGET_EXOME_control_MBRep_T22_merged_targetExtract.rmdup.bam.fastq.gz
68 @RG\tID:TP68\tLB:Lib_68_tumor\tSM:MBRep_T45_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031534_TARGET_EXOME_tumor_MBRep_T45_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031534_TARGET_EXOME_tumor_MBRep_T45_merged_targetExtract.rmdup.bam.fastq.gz
69 @RG\tID:TP69\tLB:Lib_69_control\tSM:MBRep_T26_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031535_TARGET_EXOME_control_MBRep_T26_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031535_TARGET_EXOME_control_MBRep_T26_merged_targetExtract.rmdup.bam.fastq.gz
70 @RG\tID:TP70\tLB:Lib_70_tumor\tSM:MBRep_T51_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031536_TARGET_EXOME_tumor_MBRep_T51_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031536_TARGET_EXOME_tumor_MBRep_T51_merged_targetExtract.rmdup.bam.fastq.gz
71 @RG\tID:TP71\tLB:Lib_71_tumor\tSM:MBRep_T56_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031537_TARGET_EXOME_tumor_MBRep_T56_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031537_TARGET_EXOME_tumor_MBRep_T56_merged_targetExtract.rmdup.bam.fastq.gz
72 @RG\tID:TP72\tLB:Lib_72_control\tSM:MBRep_T3control\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031538_TARGET_EXOME_control_MBRep_T3_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031538_TARGET_EXOME_control_MBRep_T3_targetExtract.rmdup.bam.fastq.gz
73 @RG\tID:TP73\tLB:Lib_73_control\tSM:MBRep_T61_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031539_TARGET_EXOME_control_MBRep_T61_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031539_TARGET_EXOME_control_MBRep_T61_merged_targetExtract.rmdup.bam.fastq.gz
74 @RG\tID:TP74\tLB:Lib_74_control\tSM:MBRep_T48_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031540_TARGET_EXOME_control_MBRep_T48_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031540_TARGET_EXOME_control_MBRep_T48_merged_targetExtract.rmdup.bam.fastq.gz
75 @RG\tID:TP75\tLB:Lib_75_tumor\tSM:MBRep_T61_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031541_TARGET_EXOME_tumor_MBRep_T61_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031541_TARGET_EXOME_tumor_MBRep_T61_merged_targetExtract.rmdup.bam.fastq.gz
76 @RG\tID:TP76\tLB:Lib_76_tumor\tSM:MBRep_T11tumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031542_TARGET_EXOME_tumor_MBRep_T11_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031542_TARGET_EXOME_tumor_MBRep_T11_targetExtract.rmdup.bam.fastq.gz
77 @RG\tID:TP77\tLB:Lib_77_tumor\tSM:MBRep_T48_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031543_TARGET_EXOME_tumor_MBRep_T48_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031543_TARGET_EXOME_tumor_MBRep_T48_merged_targetExtract.rmdup.bam.fastq.gz
78 @RG\tID:TP78\tLB:Lib_78_tumor\tSM:MBRep_T24_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031544_TARGET_EXOME_tumor_MBRep_T24_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031544_TARGET_EXOME_tumor_MBRep_T24_merged_targetExtract.rmdup.bam.fastq.gz
79 @RG\tID:TP79\tLB:Lib_79_control\tSM:MBRep_T40_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031545_TARGET_EXOME_control_MBRep_T40_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031545_TARGET_EXOME_control_MBRep_T40_merged_targetExtract.rmdup.bam.fastq.gz
80 @RG\tID:TP80\tLB:Lib_80_tumor\tSM:MBRep_T35_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031546_TARGET_EXOME_tumor_MBRep_T35_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031546_TARGET_EXOME_tumor_MBRep_T35_merged_targetExtract.rmdup.bam.fastq.gz
81 @RG\tID:TP81\tLB:Lib_81_tumor\tSM:MBRep_T73_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031547_TARGET_EXOME_tumor_MBRep_T73_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031547_TARGET_EXOME_tumor_MBRep_T73_merged_targetExtract.rmdup.bam.fastq.gz
82 @RG\tID:TP82\tLB:Lib_82_control\tSM:MBRep_T64_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031548_TARGET_EXOME_control_MBRep_T64_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031548_TARGET_EXOME_control_MBRep_T64_merged_targetExtract.rmdup.bam.fastq.gz
83 @RG\tID:TP83\tLB:Lib_83_tumor\tSM:MBRep_T78_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031549_TARGET_EXOME_tumor_MBRep_T78_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031549_TARGET_EXOME_tumor_MBRep_T78_merged_targetExtract.rmdup.bam.fastq.gz
84 @RG\tID:TP84\tLB:Lib_84_control\tSM:MBRep_T4control\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031550_TARGET_EXOME_control_MBRep_T4_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031550_TARGET_EXOME_control_MBRep_T4_targetExtract.rmdup.bam.fastq.gz
85 @RG\tID:TP85\tLB:Lib_85_tumor\tSM:MBRep_T49_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031551_TARGET_EXOME_tumor_MBRep_T49_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031551_TARGET_EXOME_tumor_MBRep_T49_merged_targetExtract.rmdup.bam.fastq.gz
86 @RG\tID:TP86\tLB:Lib_86_control\tSM:MBRep_T5control\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031552_TARGET_EXOME_control_MBRep_T5_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031552_TARGET_EXOME_control_MBRep_T5_targetExtract.rmdup.bam.fastq.gz
87 @RG\tID:TP87\tLB:Lib_87_control\tSM:MBRep_T69_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031553_TARGET_EXOME_control_MBRep_T69_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031553_TARGET_EXOME_control_MBRep_T69_merged_targetExtract.rmdup.bam.fastq.gz
88 @RG\tID:TP88\tLB:Lib_88_tumor\tSM:MBRep_T32_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031554_TARGET_EXOME_tumor_MBRep_T32_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031554_TARGET_EXOME_tumor_MBRep_T32_merged_targetExtract.rmdup.bam.fastq.gz
89 @RG\tID:TP89\tLB:Lib_89_control\tSM:MBRep_T51_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031555_TARGET_EXOME_control_MBRep_T51_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031555_TARGET_EXOME_control_MBRep_T51_merged_targetExtract.rmdup.bam.fastq.gz
90 @RG\tID:TP90\tLB:Lib_90_control\tSM:MBRep_T91_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031556_TARGET_EXOME_control_MBRep_T91_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031556_TARGET_EXOME_control_MBRep_T91_merged_targetExtract.rmdup.bam.fastq.gz
91 @RG\tID:TP91\tLB:Lib_91_control\tSM:MBRep_T54_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031557_TARGET_EXOME_control_MBRep_T54_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031557_TARGET_EXOME_control_MBRep_T54_merged_targetExtract.rmdup.bam.fastq.gz
92 @RG\tID:TP92\tLB:Lib_92_tumor\tSM:MBRep_T69_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031558_TARGET_EXOME_tumor_MBRep_T69_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031558_TARGET_EXOME_tumor_MBRep_T69_merged_targetExtract.rmdup.bam.fastq.gz
93 @RG\tID:TP93\tLB:Lib_93_control\tSM:MBRep_T36_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031559_TARGET_EXOME_control_MBRep_T36_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031559_TARGET_EXOME_control_MBRep_T36_merged_targetExtract.rmdup.bam.fastq.gz
94 @RG\tID:TP94\tLB:Lib_94_tumor\tSM:MBRep_T26_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031560_TARGET_EXOME_tumor_MBRep_T26_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031560_TARGET_EXOME_tumor_MBRep_T26_merged_targetExtract.rmdup.bam.fastq.gz
95 @RG\tID:TP95\tLB:Lib_95_control\tSM:MBRep_T28_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031561_TARGET_EXOME_control_MBRep_T28_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031561_TARGET_EXOME_control_MBRep_T28_merged_targetExtract.rmdup.bam.fastq.gz
96 @RG\tID:TP96\tLB:Lib_96_control\tSM:MBRep_T78_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031562_TARGET_EXOME_control_MBRep_T78_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031562_TARGET_EXOME_control_MBRep_T78_merged_targetExtract.rmdup.bam.fastq.gz
97 @RG\tID:TP97\tLB:Lib_97_control\tSM:MBRep_T71_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031563_TARGET_EXOME_control_MBRep_T71_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031563_TARGET_EXOME_control_MBRep_T71_merged_targetExtract.rmdup.bam.fastq.gz
98 @RG\tID:TP98\tLB:Lib_98_control\tSM:MBRep_T23_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031564_TARGET_EXOME_control_MBRep_T23_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031564_TARGET_EXOME_control_MBRep_T23_merged_targetExtract.rmdup.bam.fastq.gz
99 @RG\tID:TP99\tLB:Lib_99_control\tSM:MBRep_T83_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031565_TARGET_EXOME_control_MBRep_T83_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031565_TARGET_EXOME_control_MBRep_T83_merged_targetExtract.rmdup.bam.fastq.gz
100 @RG\tID:TP100\tLB:Lib_100_tumor\tSM:MBRep_T4tumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031566_TARGET_EXOME_tumor_MBRep_T4_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031566_TARGET_EXOME_tumor_MBRep_T4_targetExtract.rmdup.bam.fastq.gz
101 @RG\tID:TP101\tLB:Lib_101_control\tSM:MBRep_T44_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031567_TARGET_EXOME_control_MBRep_T44_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031567_TARGET_EXOME_control_MBRep_T44_merged_targetExtract.rmdup.bam.fastq.gz
102 @RG\tID:TP102\tLB:Lib_102_tumor\tSM:MBRep_T70_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031568_TARGET_EXOME_tumor_MBRep_T70_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031568_TARGET_EXOME_tumor_MBRep_T70_merged_targetExtract.rmdup.bam.fastq.gz
103 @RG\tID:TP103\tLB:Lib_103_control\tSM:MBRep_T88_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031569_TARGET_EXOME_control_MBRep_T88_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031569_TARGET_EXOME_control_MBRep_T88_merged_targetExtract.rmdup.bam.fastq.gz
104 @RG\tID:TP104\tLB:Lib_104_control\tSM:MBRep_T29_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031570_TARGET_EXOME_control_MBRep_T29_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031570_TARGET_EXOME_control_MBRep_T29_merged_targetExtract.rmdup.bam.fastq.gz
105 @RG\tID:TP105\tLB:Lib_105_tumor\tSM:MBRep_T22_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031571_TARGET_EXOME_tumor_MBRep_T22_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031571_TARGET_EXOME_tumor_MBRep_T22_merged_targetExtract.rmdup.bam.fastq.gz
106 @RG\tID:TP106\tLB:Lib_106_tumor\tSM:MBRep_T60_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031572_TARGET_EXOME_tumor_MBRep_T60_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031572_TARGET_EXOME_tumor_MBRep_T60_merged_targetExtract.rmdup.bam.fastq.gz
107 @RG\tID:TP107\tLB:Lib_107_control\tSM:MBRep_T38_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031573_TARGET_EXOME_control_MBRep_T38_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031573_TARGET_EXOME_control_MBRep_T38_merged_targetExtract.rmdup.bam.fastq.gz
108 @RG\tID:TP108\tLB:Lib_108_tumor\tSM:MBRep_T53_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031574_TARGET_EXOME_tumor_MBRep_T53_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031574_TARGET_EXOME_tumor_MBRep_T53_merged_targetExtract.rmdup.bam.fastq.gz
109 @RG\tID:TP109\tLB:Lib_109_tumor\tSM:MBRep_T13_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031575_TARGET_EXOME_tumor_MBRep_T13_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031575_TARGET_EXOME_tumor_MBRep_T13_merged_targetExtract.rmdup.bam.fastq.gz
110 @RG\tID:TP110\tLB:Lib_110_control\tSM:MBRep_T89_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031576_TARGET_EXOME_control_MBRep_T89_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031576_TARGET_EXOME_control_MBRep_T89_merged_targetExtract.rmdup.bam.fastq.gz
111 @RG\tID:TP111\tLB:Lib_111_control\tSM:MBRep_T63_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031577_TARGET_EXOME_control_MBRep_T63_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031577_TARGET_EXOME_control_MBRep_T63_merged_targetExtract.rmdup.bam.fastq.gz
112 @RG\tID:TP112\tLB:Lib_112_control\tSM:MBRep_T13_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031578_TARGET_EXOME_control_MBRep_T13_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031578_TARGET_EXOME_control_MBRep_T13_merged_targetExtract.rmdup.bam.fastq.gz
113 @RG\tID:TP113\tLB:Lib_113_control\tSM:MBRep_T46_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031579_TARGET_EXOME_control_MBRep_T46_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031579_TARGET_EXOME_control_MBRep_T46_merged_targetExtract.rmdup.bam.fastq.gz
114 @RG\tID:TP114\tLB:Lib_114_tumor\tSM:MBRep_T63_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031580_TARGET_EXOME_tumor_MBRep_T63_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031580_TARGET_EXOME_tumor_MBRep_T63_merged_targetExtract.rmdup.bam.fastq.gz
115 @RG\tID:TP115\tLB:Lib_115_tumor\tSM:MBRep_T90_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031581_TARGET_EXOME_tumor_MBRep_T90_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031581_TARGET_EXOME_tumor_MBRep_T90_merged_targetExtract.rmdup.bam.fastq.gz
116 @RG\tID:TP116\tLB:Lib_116_control\tSM:MBRep_T92_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031582_TARGET_EXOME_control_MBRep_T92_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031582_TARGET_EXOME_control_MBRep_T92_merged_targetExtract.rmdup.bam.fastq.gz
117 @RG\tID:TP117\tLB:Lib_117_control\tSM:MBRep_T6control\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031583_TARGET_EXOME_control_MBRep_T6_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031583_TARGET_EXOME_control_MBRep_T6_targetExtract.rmdup.bam.fastq.gz
118 @RG\tID:TP118\tLB:Lib_118_control\tSM:MBRep_T85_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031584_TARGET_EXOME_control_MBRep_T85_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031584_TARGET_EXOME_control_MBRep_T85_merged_targetExtract.rmdup.bam.fastq.gz
119 @RG\tID:TP119\tLB:Lib_119_control\tSM:MBRep_T93_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031585_TARGET_EXOME_control_MBRep_T93_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031585_TARGET_EXOME_control_MBRep_T93_merged_targetExtract.rmdup.bam.fastq.gz
120 @RG\tID:TP120\tLB:Lib_120_control\tSM:MBRep_T56_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031586_TARGET_EXOME_control_MBRep_T56_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031586_TARGET_EXOME_control_MBRep_T56_merged_targetExtract.rmdup.bam.fastq.gz
121 @RG\tID:TP121\tLB:Lib_121_tumor\tSM:MBRep_T66_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031587_TARGET_EXOME_tumor_MBRep_T66_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031587_TARGET_EXOME_tumor_MBRep_T66_merged_targetExtract.rmdup.bam.fastq.gz
122 @RG\tID:TP122\tLB:Lib_122_control\tSM:MBRep_T12control\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031588_TARGET_EXOME_control_MBRep_T12_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031588_TARGET_EXOME_control_MBRep_T12_targetExtract.rmdup.bam.fastq.gz
123 @RG\tID:TP123\tLB:Lib_123_control\tSM:MBRep_T30_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031589_TARGET_EXOME_control_MBRep_T30_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031589_TARGET_EXOME_control_MBRep_T30_merged_targetExtract.rmdup.bam.fastq.gz
124 @RG\tID:TP124\tLB:Lib_124_control\tSM:MBRep_T39_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031590_TARGET_EXOME_control_MBRep_T39_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031590_TARGET_EXOME_control_MBRep_T39_merged_targetExtract.rmdup.bam.fastq.gz
125 @RG\tID:TP125\tLB:Lib_125_tumor\tSM:MBRep_T46_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031591_TARGET_EXOME_tumor_MBRep_T46_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031591_TARGET_EXOME_tumor_MBRep_T46_merged_targetExtract.rmdup.bam.fastq.gz
126 @RG\tID:TP126\tLB:Lib_126_tumor\tSM:MBRep_T93_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031592_TARGET_EXOME_tumor_MBRep_T93_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031592_TARGET_EXOME_tumor_MBRep_T93_merged_targetExtract.rmdup.bam.fastq.gz
127 @RG\tID:TP127\tLB:Lib_127_tumor\tSM:MBRep_T89_mergedtumor\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031593_TARGET_EXOME_tumor_MBRep_T89_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031593_TARGET_EXOME_tumor_MBRep_T89_merged_targetExtract.rmdup.bam.fastq.gz
128 @RG\tID:TP128\tLB:Lib_128_control\tSM:MBRep_T45_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031594_TARGET_EXOME_control_MBRep_T45_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031594_TARGET_EXOME_control_MBRep_T45_merged_targetExtract.rmdup.bam.fastq.gz
129 @RG\tID:TP129\tLB:Lib_129_control\tSM:MBRep_T70_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031595_TARGET_EXOME_control_MBRep_T70_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031595_TARGET_EXOME_control_MBRep_T70_merged_targetExtract.rmdup.bam.fastq.gz
130 @RG\tID:TP130\tLB:Lib_130_control\tSM:MBRep_T49_mergedcontrol\tPL:ILLUMINA ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031596_TARGET_EXOME_control_MBRep_T49_merged_targetExtract.rmdup.bam.fastq.gz ../FASTQ/SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001031596_TARGET_EXOME_control_MBRep_T49_merged_targetExtract.rmdup.bam.fastq.gz