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KLTpicker

KLT picker: Particle picking using data-driven optimal templates Current version: 1.0 Date: 12/2019

This is the MATLAB version containing the complete source code of the KLT picker. A standalone application can be downloaded from https://sites.google.com/site/yoelshkolnisky/software (unfortunately it is too large to be hosted on github). A Python version is currently under development. Subscribe to http://github.com/amitayeldar/KLTpicker/ for updates about the KLTpicker.

Please cite the following paper when using this package: A. Eldar, B. Landa, and Y. Shkolnisky, "KLT picker: Particle picking using data-driven optimal templates", Journal of Structural Biology, accetpted for publication.

Getting started

  1. Download and extract the package.
  2. Please read the userManual file in the extracted directory.
  3. Run MATLAB at the extracted directory and type in the MATLAB Command Window: KLTpicker_start

Standalone version:

See userManual for installation and execution instructions.

Revision History:

1.21 Some more speedup.

1.2 Significant speedup.

1.11 Fix bug in loading box files into RELION.

1.1 Add support for rectangular micrographs.