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Hi. I'm trying to read in a h5ad file which was generated from seurat R package. I am using this function: adata = sdm.read_spatialdm_h5ad(filename), but I get KeyError: 'geneInter'. Is this not the right way to read in the data? Thanks.
The text was updated successfully, but these errors were encountered:
Hey @anamaria-uofg . Thanks for using our package.
Please try reading the h5ad file using scanpy and then run spatialdm as described in our tutorials. sdm.read_spatialdm_h5ad could be useful to read intermediate spatialdm objects.
Hi. I'm trying to read in a h5ad file which was generated from seurat R package. I am using this function: adata = sdm.read_spatialdm_h5ad(filename), but I get KeyError: 'geneInter'. Is this not the right way to read in the data? Thanks.
The text was updated successfully, but these errors were encountered: