Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Refactoring and updating new features (v0.1.1) #1

Open
Lupin1998 opened this issue Jun 20, 2022 · 1 comment
Open

Refactoring and updating new features (v0.1.1) #1

Lupin1998 opened this issue Jun 20, 2022 · 1 comment
Assignees
Labels
enhancement New feature or request update Supporting new methods and updating new features

Comments

@Lupin1998
Copy link
Member

Lupin1998 commented Jun 20, 2022

Refactoring OpenBioSeq to v0.1.1 and supporting the following features:

  1. Refact code structures according to OpenMixup.
  2. Support the online document for OpenBioSeq (built on Read the Docs).
  3. Support new backbone architectures for both 1D and 2D sequences.
  4. Support more regression losses (Focal L1/L2 loss, Balanced L1 loss, Balanced MSE loss) and more regression metrics in the regression dataset.
  5. Update training settings and benchmarks to support self-supervised learning (SSL) methods (e.g., new methods and benchmark configs).
  6. Refine the setup for the local installation and PyPi release in setup.py and setup.cfg. View PyPi project of OpenBioSeq (commit https://github.com/Westlake-AI/OpenBioSeq).

We will release OpenBioSeq v0.1.1 after code refactoring.

@Lupin1998 Lupin1998 added the update Supporting new methods and updating new features label Jun 20, 2022
@Lupin1998 Lupin1998 self-assigned this Jun 20, 2022
@Lupin1998 Lupin1998 added the enhancement New feature or request label Oct 9, 2022
Lupin1998 added a commit that referenced this issue Oct 20, 2022
@Lupin1998
Copy link
Member Author

Refine the setup for the local installation and PyPi release in MANIFEST.in, setup.py, and setup.cfg. View PyPi project of OpenBioSeq (commit d8c1c9a).

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
enhancement New feature or request update Supporting new methods and updating new features
Projects
None yet
Development

No branches or pull requests

1 participant