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Support for compressed VCF files #56

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dbrami opened this issue Jun 15, 2022 · 1 comment

dbrami commented Jun 15, 2022

Hi Kevin,
I started to try playing with the script but I'm running into a few speed bumps that I thought I would share in different tickets):

does not support .vcf.gz files
Not sure if BCF is more useful but for now, my data is in .vcf.gz

Is supporting compressed VCF hard to implement?

Contributor

apriha commented Jul 9, 2022

Hi @dbrami, gzip compressed VCF files are supported... Is the problem file provided here?

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