{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":116827112,"defaultBranch":"master","name":"PopPUNK","ownerLogin":"bacpop","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2018-01-09T14:33:39.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/78856671?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1720176411.0","currentOid":""},"activityList":{"items":[{"before":"6ec390fc33d5ba34d5b515cd7f9aa48867c2064f","after":"3ee8639308972f55fbff7d27dd21ab4b672839f7","ref":"refs/heads/sketchlibAssemblyqc-assin-move","pushedAt":"2024-07-05T10:50:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"absternator","name":"Anmol Thapar","path":"/absternator","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68182660?s=80&v=4"},"commit":{"message":"chore: update PopPUNK version to 2.6.7","shortMessageHtmlLink":"chore: update PopPUNK version to 2.6.7"}},{"before":null,"after":"6ec390fc33d5ba34d5b515cd7f9aa48867c2064f","ref":"refs/heads/sketchlibAssemblyqc-assin-move","pushedAt":"2024-07-05T10:46:51.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"absternator","name":"Anmol Thapar","path":"/absternator","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68182660?s=80&v=4"},"commit":{"message":"feat: move sketchlibAssemblyQC call in assign\n\n- move to assign_cluster_hdf5\n- writes to qc report and combines with qc run with with dist matrix","shortMessageHtmlLink":"feat: move sketchlibAssemblyQC call in assign"}},{"before":"db1bce4af630acd38cce413d0bd865d1335a5df0","after":null,"ref":"refs/heads/assign-output-qfile","pushedAt":"2024-07-03T08:44:54.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"johnlees","name":"John Lees","path":"/johnlees","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6331837?s=80&v=4"}},{"before":"27982a542b8cdf3768b445604f550689ea05c95e","after":"f7e9416660b7028516d04c78f95206413fa2e15b","ref":"refs/heads/master","pushedAt":"2024-07-03T08:44:47.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"johnlees","name":"John Lees","path":"/johnlees","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6331837?s=80&v=4"},"commit":{"message":"Merge pull request #315 from bacpop/assign-output-qfile\n\nUpdate cluster assign to write qcreport on qc failiures","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2375018930\" data-permission-text=\"Title is private\" data-url=\"https://github.com/bacpop/PopPUNK/issues/315\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/bacpop/PopPUNK/pull/315/hovercard\" href=\"https://github.com/bacpop/PopPUNK/pull/315\">#315</a> from bacpop/assign-output-qfile"}},{"before":"63accc5adf97f530ee8f08eb98b2ef12170e8435","after":"db1bce4af630acd38cce413d0bd865d1335a5df0","ref":"refs/heads/assign-output-qfile","pushedAt":"2024-07-03T07:22:03.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"absternator","name":"Anmol Thapar","path":"/absternator","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68182660?s=80&v=4"},"commit":{"message":"chore: update version","shortMessageHtmlLink":"chore: update version"}},{"before":null,"after":"63accc5adf97f530ee8f08eb98b2ef12170e8435","ref":"refs/heads/assign-output-qfile","pushedAt":"2024-06-26T10:29:15.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"absternator","name":"Anmol Thapar","path":"/absternator","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68182660?s=80&v=4"},"commit":{"message":"bug: update cluster assign to write qcreport on qc failiures","shortMessageHtmlLink":"bug: update cluster assign to write qcreport on qc failiures"}},{"before":"1319225d241f780a8c8d9c1207b7f61a0811267f","after":"5e63f2e30a13c61d0e682356dd68f29724a5b1ff","ref":"refs/heads/db_plots","pushedAt":"2024-05-24T05:37:16.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Enable compatibility with CPU-only mandrake","shortMessageHtmlLink":"Enable compatibility with CPU-only mandrake"}},{"before":"986a43d44e2dc68e96ce2dc1471840b1abfb6dc7","after":"1319225d241f780a8c8d9c1207b7f61a0811267f","ref":"refs/heads/db_plots","pushedAt":"2024-05-24T05:03:56.000Z","pushType":"pr_merge","commitsCount":15,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Updates from master branch\n\nUpdate from master branch","shortMessageHtmlLink":"Updates from master branch"}},{"before":"ec4f8c10cb4cf12192aa00573005e4314a276073","after":"986a43d44e2dc68e96ce2dc1471840b1abfb6dc7","ref":"refs/heads/db_plots","pushedAt":"2024-03-13T10:09:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Fix BFS arg","shortMessageHtmlLink":"Fix BFS arg"}},{"before":"3c4a9cb121462208b9d21c1894679ab4b5693a6d","after":"ec4f8c10cb4cf12192aa00573005e4314a276073","ref":"refs/heads/db_plots","pushedAt":"2024-03-13T09:10:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Fix component graph construction","shortMessageHtmlLink":"Fix component graph construction"}},{"before":"b291712001c5e7a8fabf777d3fcca2bcc81d2861","after":"27982a542b8cdf3768b445604f550689ea05c95e","ref":"refs/heads/master","pushedAt":"2024-03-12T17:49:28.000Z","pushType":"pr_merge","commitsCount":10,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Merge pull request #307 from bacpop/viz_query_fix\n\nOutput external clusterings with visualisations","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2182021602\" data-permission-text=\"Title is private\" data-url=\"https://github.com/bacpop/PopPUNK/issues/307\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/bacpop/PopPUNK/pull/307/hovercard\" href=\"https://github.com/bacpop/PopPUNK/pull/307\">#307</a> from bacpop/viz_query_fix"}},{"before":"d2421f1e92d6c9a47b79bd1b1653dd9ec5361835","after":"d5179fdbe23af3b65d83c139e3513f2d00e4c42e","ref":"refs/heads/viz_query_fix","pushedAt":"2024-03-12T17:16:26.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Bump version","shortMessageHtmlLink":"Bump version"}},{"before":"9a6e4b7f096edb0ecfc41b621185b574bf160a34","after":"d2421f1e92d6c9a47b79bd1b1653dd9ec5361835","ref":"refs/heads/viz_query_fix","pushedAt":"2024-03-12T17:14:58.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Merge branch 'viz_query_fix' of https://github.com/bacpop/PopPUNK into viz_query_fix","shortMessageHtmlLink":"Merge branch 'viz_query_fix' of <a href=\"https://github.com/bacpop/PopPUNK\">https://github.com/bacpop/PopPUNK</a> int…"}},{"before":"43dfacccfdb9bad856e439942d0caae12afe68f3","after":"9a6e4b7f096edb0ecfc41b621185b574bf160a34","ref":"refs/heads/viz_query_fix","pushedAt":"2024-03-12T17:13:21.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Update PopPUNK/visualise.py\r\n\r\nClarify if/else\n\nCo-authored-by: John Lees <lees.john6@gmail.com>","shortMessageHtmlLink":"Update PopPUNK/visualise.py"}},{"before":"44a78c40387c5ef45a1bf87e4f83cfa575456a74","after":"43dfacccfdb9bad856e439942d0caae12afe68f3","ref":"refs/heads/viz_query_fix","pushedAt":"2024-03-12T15:39:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Enable external clustering to be used","shortMessageHtmlLink":"Enable external clustering to be used"}},{"before":"ab44faf8379c8c50399e62419bf6b72c8bcf97fb","after":"44a78c40387c5ef45a1bf87e4f83cfa575456a74","ref":"refs/heads/viz_query_fix","pushedAt":"2024-03-12T15:10:42.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Add beebop test","shortMessageHtmlLink":"Add beebop test"}},{"before":"67c7314cb625b8f28ae73d5e2ac50c42bb5c1d61","after":"ab44faf8379c8c50399e62419bf6b72c8bcf97fb","ref":"refs/heads/viz_query_fix","pushedAt":"2024-03-12T13:38:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Update cluster file name","shortMessageHtmlLink":"Update cluster file name"}},{"before":"ac66b9b1660ac9bec9f3d35ee5586badad6f0649","after":"67c7314cb625b8f28ae73d5e2ac50c42bb5c1d61","ref":"refs/heads/viz_query_fix","pushedAt":"2024-03-12T13:08:36.000Z","pushType":"push","commitsCount":5,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Merge master","shortMessageHtmlLink":"Merge master"}},{"before":null,"after":"ac66b9b1660ac9bec9f3d35ee5586badad6f0649","ref":"refs/heads/viz_query_fix","pushedAt":"2024-03-12T13:00:47.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Reorder cluster parsing","shortMessageHtmlLink":"Reorder cluster parsing"}},{"before":"c4ba9d5c43fcfc4506f0234ec501aa500909fd96","after":"3c4a9cb121462208b9d21c1894679ab4b5693a6d","ref":"refs/heads/db_plots","pushedAt":"2024-03-12T12:25:12.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Rename columns","shortMessageHtmlLink":"Rename columns"}},{"before":"e8cb660307febe6fd1c40a37372580b4618ca318","after":"c4ba9d5c43fcfc4506f0234ec501aa500909fd96","ref":"refs/heads/db_plots","pushedAt":"2024-03-12T11:12:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Update column names","shortMessageHtmlLink":"Update column names"}},{"before":"b4773ddf060f63a4b27e7f4ed1749b56618f0611","after":null,"ref":"refs/heads/fix_external_clustering","pushedAt":"2024-03-11T17:40:53.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"johnlees","name":"John Lees","path":"/johnlees","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6331837?s=80&v=4"}},{"before":"27e7f85647cf56e9ed6b4a8c10c5b32a8d35853e","after":"b291712001c5e7a8fabf777d3fcca2bcc81d2861","ref":"refs/heads/master","pushedAt":"2024-03-11T17:40:47.000Z","pushType":"pr_merge","commitsCount":4,"pusher":{"login":"johnlees","name":"John Lees","path":"/johnlees","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6331837?s=80&v=4"},"commit":{"message":"Merge pull request #305 from bacpop/fix_external_clustering\n\nAvoid overwriting external clustering in visualise script","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"2179448697\" data-permission-text=\"Title is private\" data-url=\"https://github.com/bacpop/PopPUNK/issues/305\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/bacpop/PopPUNK/pull/305/hovercard\" href=\"https://github.com/bacpop/PopPUNK/pull/305\">#305</a> from bacpop/fix_external_clustering"}},{"before":"d56b5aefd7c3d451781e877a44459306a640615e","after":"b4773ddf060f63a4b27e7f4ed1749b56618f0611","ref":"refs/heads/fix_external_clustering","pushedAt":"2024-03-11T15:07:51.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Add external clustering test","shortMessageHtmlLink":"Add external clustering test"}},{"before":"f4851e32f70f7536d7489ca4c4d502c094ff575f","after":"d56b5aefd7c3d451781e877a44459306a640615e","ref":"refs/heads/fix_external_clustering","pushedAt":"2024-03-11T14:58:25.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Remove lineage directories","shortMessageHtmlLink":"Remove lineage directories"}},{"before":null,"after":"f4851e32f70f7536d7489ca4c4d502c094ff575f","ref":"refs/heads/fix_external_clustering","pushedAt":"2024-03-11T14:35:34.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Avoid overwriting external clustering","shortMessageHtmlLink":"Avoid overwriting external clustering"}},{"before":"f5ec728c1a8718ee766fd3bdad69a7e03df2f198","after":"e8cb660307febe6fd1c40a37372580b4618ca318","ref":"refs/heads/db_plots","pushedAt":"2024-03-11T14:17:12.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Change network parsing","shortMessageHtmlLink":"Change network parsing"}},{"before":"025a818de6908236f6064d1441a3b36df7350e0c","after":"f5ec728c1a8718ee766fd3bdad69a7e03df2f198","ref":"refs/heads/db_plots","pushedAt":"2024-02-29T17:39:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Update function call","shortMessageHtmlLink":"Update function call"}},{"before":"5652532e607a6615cec7315c85c28333cdc91c2b","after":"025a818de6908236f6064d1441a3b36df7350e0c","ref":"refs/heads/db_plots","pushedAt":"2024-02-29T16:46:20.000Z","pushType":"push","commitsCount":91,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Resolve conflicts with master","shortMessageHtmlLink":"Resolve conflicts with master"}},{"before":"2920b004ed83c2fa808bf80e2408426b5a769698","after":"82649c58f54870fbe991f185147bebbd87b914fd","ref":"refs/heads/gpu_dbscan","pushedAt":"2024-02-29T16:40:06.000Z","pushType":"push","commitsCount":32,"pusher":{"login":"nickjcroucher","name":null,"path":"/nickjcroucher","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/16579395?s=80&v=4"},"commit":{"message":"Resolve conflicts","shortMessageHtmlLink":"Resolve conflicts"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEd7MkaQA","startCursor":null,"endCursor":null}},"title":"Activity · bacpop/PopPUNK"}