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Confirmed that downgrading pandas to 1.5.3 allows tests to pass while pandas > 2.0.0 causes test failures:
FAILED tests/test_bbclient.py::TestBBClientCaching::test_bed_caching_from_path - pandas.errors.ParserError: CSV parse error: Empty CSV file or block: cannot infer number of columns FAILED tests/test_bbclient.py::TestBBClientCaching::test_bed_caching_from_region_set - pandas.errors.ParserError: CSV parse error: Empty CSV file or block: cannot infer number of columns FAILED tests/test_bbclient.py::TestBBClientCaching::test_bedset_caching - pandas.errors.ParserError: CSV parse error: Empty CSV file or block: cannot infer number of columns FAILED tests/test_bbclient.py::TestBBClientCaching::test_error_bed_not_in_cache - pandas.errors.ParserError: CSV parse error: Empty CSV file or block: cannot infer number of columns FAILED tests/test_bbclient.py::TestBBClientCaching::test_error_bedset_not_in_cache - pandas.errors.ParserError: CSV parse error: Empty CSV file or block: cannot infer number of columns FAILED tests/test_bbclient.py::TestBBClientCaching::test_remove_bed_from_cache - pandas.errors.ParserError: CSV parse error: Empty CSV file or block: cannot infer number of columns FAILED tests/test_bbclient.py::TestBBClientCaching::test_remove_bedset_from_cache - pandas.errors.ParserError: CSV parse error: Empty CSV file or block: cannot infer number of columns FAILED tests/test_io.py::TestRegionSet::test_region_set_from_path_backed[/home/drc/GITHUB/geniml/tests/data/io_data/bed/s1_a_bed_gz] - pandas.errors.ParserError: CSV parse error: Empty CSV file or block: cannot infer number of columns FAILED tests/test_io.py::TestRegionSet::test_to_genomic_ranges[/home/drc/GITHUB/geniml/tests/data/io_data/bed/s1_a_bed_gz] - pandas.errors.ParserError: CSV parse error: Empty CSV file or block: cannot infer number of columns FAILED tests/test_io.py::TestRegionSet::test_calculation_id - pandas.errors.ParserError: CSV parse error: Empty CSV file or block: cannot infer number of columns
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Confirmed that downgrading pandas to 1.5.3 allows tests to pass while pandas > 2.0.0 causes test failures:
The text was updated successfully, but these errors were encountered: