Using your tool for single cell data barcoded with split-seq technology and not droplet based

[vasikara17]

Hello,
thank you for the very interesting tool. I am having single cell data barcoded with the split-seq technology and I would like to do a prediction with the shorts reads of potential splicing events. Is the tool supporting this type of sequencing data? I saw only 10X technology in the settings.

Best regards
VK

[eudoraleer]

Dear VK,

Thanks for the question. Currently, we only supports data from 10X Genomics, but if you have the same data structure (with 3 prime bias) and fragment length, you could do that, otherwise, we do not support at this moment.

Best regards,
Lu