{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":12300820,"defaultBranch":"master","name":"biocode","ownerLogin":"jorvis","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2013-08-22T15:37:10.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/330899?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1700200445.0","currentOid":""},"activityList":{"items":[{"before":"9f043705e436db4a17dace4a2f70be0da5dfc3b5","after":"0ba1f04d7ac3e0e381e41a7fa4e917b8c2341e9d","ref":"refs/heads/master","pushedAt":"2024-05-22T15:59:24.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"jorvis","name":"Joshua Orvis","path":"/jorvis","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/330899?s=80&v=4"},"commit":{"message":"Merge branch 'master' of github.com:jorvis/biocode","shortMessageHtmlLink":"Merge branch 'master' of github.com:jorvis/biocode"}},{"before":"49cfa8716c52b2a1ab3081b2b3a58cfbc955c811","after":"9f043705e436db4a17dace4a2f70be0da5dfc3b5","ref":"refs/heads/master","pushedAt":"2024-01-04T05:38:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jorvis","name":"Joshua Orvis","path":"/jorvis","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/330899?s=80&v=4"},"commit":{"message":"Critical fix to strip_fasta_headers_after_regex.py. Previous version didn't have newlines before headers after the first one","shortMessageHtmlLink":"Critical fix to strip_fasta_headers_after_regex.py. Previous version …"}},{"before":"4a8d3b63c4a0769c80d56d68f4c9b5f9f335a1bb","after":"49cfa8716c52b2a1ab3081b2b3a58cfbc955c811","ref":"refs/heads/master","pushedAt":"2024-01-04T05:27:27.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"jorvis","name":"Joshua Orvis","path":"/jorvis","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/330899?s=80&v=4"},"commit":{"message":"Added script: fasta/strip_fasta_headers_after_regex.py","shortMessageHtmlLink":"Added script: fasta/strip_fasta_headers_after_regex.py"}},{"before":"9686bb1bac95ede7eea2a84d194b538a8dd6279c","after":"4a8d3b63c4a0769c80d56d68f4c9b5f9f335a1bb","ref":"refs/heads/master","pushedAt":"2023-11-17T15:48:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jorvis","name":"Joshua Orvis","path":"/jorvis","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/330899?s=80&v=4"},"commit":{"message":"Updated docker image to use ubuntu 22.04 as base, and corrected R module phyloseq installation syntax","shortMessageHtmlLink":"Updated docker image to use ubuntu 22.04 as base, and corrected R mod…"}},{"before":"3efc84ca3efae4258687f988e50fd686a9cfc55b","after":"9686bb1bac95ede7eea2a84d194b538a8dd6279c","ref":"refs/heads/master","pushedAt":"2023-11-17T06:02:47.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"jorvis","name":"Joshua Orvis","path":"/jorvis","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/330899?s=80&v=4"},"commit":{"message":"Updated docker image for 0.11.0","shortMessageHtmlLink":"Updated docker image for 0.11.0"}},{"before":"bdc21ac31bf74455ba013efb01359ea103a1665b","after":"3efc84ca3efae4258687f988e50fd686a9cfc55b","ref":"refs/heads/master","pushedAt":"2023-11-17T05:43:27.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jorvis","name":"Joshua Orvis","path":"/jorvis","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/330899?s=80&v=4"},"commit":{"message":"Updated CHANGELOG for 0.11.0 release","shortMessageHtmlLink":"Updated CHANGELOG for 0.11.0 release"}},{"before":"4c0fbde31c3c173d070d0eff2bffa2bc34ac84be","after":"bdc21ac31bf74455ba013efb01359ea103a1665b","ref":"refs/heads/master","pushedAt":"2023-11-17T05:10:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jorvis","name":"Joshua Orvis","path":"/jorvis","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/330899?s=80&v=4"},"commit":{"message":"Restored perl version of fasta_size_report so existing pipelines don't break","shortMessageHtmlLink":"Restored perl version of fasta_size_report so existing pipelines don'…"}},{"before":"51372098cd32c9cb5d57e6c49e22c431b910c74a","after":"4c0fbde31c3c173d070d0eff2bffa2bc34ac84be","ref":"refs/heads/master","pushedAt":"2023-11-17T05:09:13.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"jorvis","name":"Joshua Orvis","path":"/jorvis","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/330899?s=80&v=4"},"commit":{"message":"Corrected issue where script assumed paths passed were relative to the script","shortMessageHtmlLink":"Corrected issue where script assumed paths passed were relative to th…"}},{"before":"f18973f82181a1af2eb95f0edb6de896b5eae699","after":"51372098cd32c9cb5d57e6c49e22c431b910c74a","ref":"refs/heads/master","pushedAt":"2023-11-17T04:46:12.000Z","pushType":"pr_merge","commitsCount":4,"pusher":{"login":"jorvis","name":"Joshua Orvis","path":"/jorvis","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/330899?s=80&v=4"},"commit":{"message":"Merge pull request #80 from RPINerd/master\n\nUpdate fasta_size_report script to python3.10","shortMessageHtmlLink":"Merge pull request <a class=\"issue-link js-issue-link\" data-error-text=\"Failed to load title\" data-id=\"1583358095\" data-permission-text=\"Title is private\" data-url=\"https://github.com/jorvis/biocode/issues/80\" data-hovercard-type=\"pull_request\" data-hovercard-url=\"/jorvis/biocode/pull/80/hovercard\" href=\"https://github.com/jorvis/biocode/pull/80\">#80</a> from RPINerd/master"}},{"before":"2c42d295cd7a78088be8c93881f48977532d9b33","after":"f18973f82181a1af2eb95f0edb6de896b5eae699","ref":"refs/heads/master","pushedAt":"2023-07-15T06:37:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jorvis","name":"Joshua Orvis","path":"/jorvis","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/330899?s=80&v=4"},"commit":{"message":"Added commas to integer outputs to make (what are typically) large numbers easier to read","shortMessageHtmlLink":"Added commas to integer outputs to make (what are typically) large nu…"}},{"before":"32ece24e204122ddc43edeb6514a67be1f5f1a37","after":"2c42d295cd7a78088be8c93881f48977532d9b33","ref":"refs/heads/master","pushedAt":"2023-07-14T17:05:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jorvis","name":"Joshua Orvis","path":"/jorvis","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/330899?s=80&v=4"},"commit":{"message":"Progress interval lines now print on same line, current file processing also printed on stderr","shortMessageHtmlLink":"Progress interval lines now print on same line, current file processi…"}},{"before":"446b96bf49734d224be68a9bc748fde97d859c6b","after":"32ece24e204122ddc43edeb6514a67be1f5f1a37","ref":"refs/heads/master","pushedAt":"2023-07-14T17:01:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jorvis","name":"Joshua Orvis","path":"/jorvis","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/330899?s=80&v=4"},"commit":{"message":"Added (optional) progress interval output to fastq_simple_stats.py","shortMessageHtmlLink":"Added (optional) progress interval output to fastq_simple_stats.py"}}],"hasNextPage":false,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEUSISbgA","startCursor":null,"endCursor":null}},"title":"Activity · jorvis/biocode"}