Fermi-lite aggressive trimming

[cgroza]

Hi,
When setting aggressive trimming in fermi-lite to pop bubbles in heterozygous regions, what is the strategy being employed.
Is the longer path in the bubble being kept or the shorter path? Or the one with highest average coverage?
I am using fermi-lite to do local assembly of ~2kb regions.

Thanks,
Cristian

[lh3]

Fermi-lite chooses the path with more reads.