{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":754898340,"defaultBranch":"master","name":"bakir","ownerLogin":"michael-ford","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2024-02-09T01:08:22.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/3802717?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1712177703.0","currentOid":""},"activityList":{"items":[{"before":"60907fdca3e4ea9d6d8697e4a78d688c1c1cce48","after":"aae1d4232d381782f87ae57a35b58b5aca8cbcf0","ref":"refs/heads/master","pushedAt":"2024-05-01T19:22:48.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Docs badge fix","shortMessageHtmlLink":"Docs badge fix"}},{"before":"67a98c29b675134dbf2bb54e42da6d32ebf0acf0","after":"60907fdca3e4ea9d6d8697e4a78d688c1c1cce48","ref":"refs/heads/master","pushedAt":"2024-05-01T19:21:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Docs badge fix","shortMessageHtmlLink":"Docs badge fix"}},{"before":"3212a16f334aebb268628649f5ee038216f41f35","after":"67a98c29b675134dbf2bb54e42da6d32ebf0acf0","ref":"refs/heads/master","pushedAt":"2024-05-01T19:17:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Docs bugfix","shortMessageHtmlLink":"Docs bugfix"}},{"before":"512edf341d3d7f3ba1fb540bd29c81f9f40a7161","after":"3212a16f334aebb268628649f5ee038216f41f35","ref":"refs/heads/master","pushedAt":"2024-05-01T18:34:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Update docs for name refactor","shortMessageHtmlLink":"Update docs for name refactor"}},{"before":"21ac3a11fccf29f4e41865eb88b0c9f80c2c9cc7","after":"512edf341d3d7f3ba1fb540bd29c81f9f40a7161","ref":"refs/heads/master","pushedAt":"2024-05-01T18:31:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Minor update","shortMessageHtmlLink":"Minor update"}},{"before":"2580b8f758d2f30ca0330f89364c4e901f495b0c","after":"21ac3a11fccf29f4e41865eb88b0c9f80c2c9cc7","ref":"refs/heads/master","pushedAt":"2024-05-01T18:28:53.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Feature/docker (#5)\n\n* Add dockerfile definition\r\n\r\n* Dockerfile fix attempt #1\r\n\r\n* Dockerfile fix attempt #2\r\n\r\n* Update for name change\r\n\r\n* Env bugfix\r\n\r\n* Env bugfix\r\n\r\n* Update docker, singularity instructions to readme","shortMessageHtmlLink":"Feature/docker (#5)"}},{"before":"f8ae75923632619d62b417c1859adc4318bc59aa","after":"78a7dd4ec5312f0931f38f0f89beb80f293bce08","ref":"refs/heads/feature/docker","pushedAt":"2024-05-01T18:24:57.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Update docker, singularity instructions to readme","shortMessageHtmlLink":"Update docker, singularity instructions to readme"}},{"before":"53ab7aa8eb023307d470cd3faba6bbcd5ae8e020","after":"f8ae75923632619d62b417c1859adc4318bc59aa","ref":"refs/heads/feature/docker","pushedAt":"2024-05-01T17:51:31.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Env bugfix","shortMessageHtmlLink":"Env bugfix"}},{"before":"3db44efc6926b7ec6ab2bc23c1f6325024d4f752","after":"53ab7aa8eb023307d470cd3faba6bbcd5ae8e020","ref":"refs/heads/feature/docker","pushedAt":"2024-05-01T17:43:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Env bugfix","shortMessageHtmlLink":"Env bugfix"}},{"before":"277fca67f1d3a3a4c4e41b575d4f987d5c5b6a42","after":"3db44efc6926b7ec6ab2bc23c1f6325024d4f752","ref":"refs/heads/feature/docker","pushedAt":"2024-05-01T17:35:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Update for name change","shortMessageHtmlLink":"Update for name change"}},{"before":"ccbca67fdda054d53da1f6b5d0fd5cacf010b037","after":"277fca67f1d3a3a4c4e41b575d4f987d5c5b6a42","ref":"refs/heads/feature/docker","pushedAt":"2024-05-01T17:16:36.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Refactor name update to BAKIR","shortMessageHtmlLink":"Refactor name update to BAKIR"}},{"before":"feed4a107efd2926e8582fb7675d90e68df64431","after":"2580b8f758d2f30ca0330f89364c4e901f495b0c","ref":"refs/heads/master","pushedAt":"2024-04-24T18:38:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Update test.yml for name refactor","shortMessageHtmlLink":"Update test.yml for name refactor"}},{"before":"57b61e6d1ae4960eb6a46f74d046a2fa91fa30ea","after":"feed4a107efd2926e8582fb7675d90e68df64431","ref":"refs/heads/master","pushedAt":"2024-04-16T18:27:55.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Refactor name update to BAKIR","shortMessageHtmlLink":"Refactor name update to BAKIR"}},{"before":"de771d27ab5c681d3955076305a2c85ce6c3aaa8","after":"57b61e6d1ae4960eb6a46f74d046a2fa91fa30ea","ref":"refs/heads/master","pushedAt":"2024-04-03T21:00:34.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Fix variant and functional variant counting in tsv output","shortMessageHtmlLink":"Fix variant and functional variant counting in tsv output"}},{"before":null,"after":"e8dcd88427e10b32a90cf6bd173b957a14e95c6f","ref":"refs/heads/hotfix/tsv-output","pushedAt":"2024-04-03T20:55:03.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Fix variant and functional variant counting in tsv output","shortMessageHtmlLink":"Fix variant and functional variant counting in tsv output"}},{"before":"77e101a658f13d43d0a558458ec5fb2a6edd8a4e","after":"ccbca67fdda054d53da1f6b5d0fd5cacf010b037","ref":"refs/heads/feature/docker","pushedAt":"2024-04-02T18:42:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Dockerfile fix attempt #2","shortMessageHtmlLink":"Dockerfile fix attempt #2"}},{"before":"6ca688bae509476b676c92f41997e2d76ed093ca","after":"77e101a658f13d43d0a558458ec5fb2a6edd8a4e","ref":"refs/heads/feature/docker","pushedAt":"2024-04-02T18:31:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Dockerfile fix attempt #1","shortMessageHtmlLink":"Dockerfile fix attempt #1"}},{"before":null,"after":"6ca688bae509476b676c92f41997e2d76ed093ca","ref":"refs/heads/feature/docker","pushedAt":"2024-03-29T18:45:12.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Add dockerfile definition","shortMessageHtmlLink":"Add dockerfile definition"}},{"before":"26ec8878588750883a99d6badb03b6336ff3530f","after":"de771d27ab5c681d3955076305a2c85ce6c3aaa8","ref":"refs/heads/master","pushedAt":"2024-03-29T18:20:41.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Various feature improvements and bugfixes\n\n - Improve function variant edit distance calculation for allele selection\n - Improve deletion calling by implementing exon identification\n - Bugfixes for special case 3DP1 deletion variants\n - Add and expand test suite","shortMessageHtmlLink":"Various feature improvements and bugfixes"}},{"before":"5c401738feed7184cc5c743a4342060ed8d72b2d","after":"26ec8878588750883a99d6badb03b6336ff3530f","ref":"refs/heads/master","pushedAt":"2024-03-02T20:35:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Bugfix in docs badge","shortMessageHtmlLink":"Bugfix in docs badge"}},{"before":"add5f5b7fea81ccd3865108b93428f9420333ded","after":"5c401738feed7184cc5c743a4342060ed8d72b2d","ref":"refs/heads/master","pushedAt":"2024-03-02T20:31:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Bugfix in docs badge","shortMessageHtmlLink":"Bugfix in docs badge"}},{"before":"14771cd37ab8cef7470ba626366d55494f79fb11","after":null,"ref":"refs/heads/feature-docs","pushedAt":"2024-03-02T20:28:14.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"}},{"before":"9e91a17a2b9b0b40ff9ba0589400f3e0178619db","after":"add5f5b7fea81ccd3865108b93428f9420333ded","ref":"refs/heads/master","pushedAt":"2024-03-02T20:28:06.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Feature docs (#3)\n\n* First build of docs\r\n\r\n* Read the docs config\r\n\r\n* Add sphinx and related\r\n\r\n* Configure mamba in readthedocs\r\n\r\n* Configure module install in readthedocs\r\n\r\n* Fix argparse error in sphinx-build, small bugfixes\r\n\r\n* Bugfix in selecting mamba\r\n\r\n* YML formatting fix\r\n\r\n* Test pip\r\n\r\n* Change TOC depth to 1\r\n\r\n* Add docs badge\r\n\r\n---------\r\n\r\nCo-authored-by: Michael Ford ","shortMessageHtmlLink":"Feature docs (#3)"}},{"before":"cbe6e1965627a8b9910c7fadbd1bd364c56ba00c","after":"14771cd37ab8cef7470ba626366d55494f79fb11","ref":"refs/heads/feature-docs","pushedAt":"2024-03-02T20:25:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Add docs badge","shortMessageHtmlLink":"Add docs badge"}},{"before":"7b2b749ea0078dc916adc2a013c52608f5eb044f","after":"cbe6e1965627a8b9910c7fadbd1bd364c56ba00c","ref":"refs/heads/feature-docs","pushedAt":"2024-03-02T20:20:14.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Change TOC depth to 1","shortMessageHtmlLink":"Change TOC depth to 1"}},{"before":"6fae3bc922f4442f7b08955128937e75a73e6232","after":"7b2b749ea0078dc916adc2a013c52608f5eb044f","ref":"refs/heads/feature-docs","pushedAt":"2024-03-02T20:16:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Test pip","shortMessageHtmlLink":"Test pip"}},{"before":"1a6b06881a4ab423631e571cb48222509d289fa2","after":"6fae3bc922f4442f7b08955128937e75a73e6232","ref":"refs/heads/feature-docs","pushedAt":"2024-03-02T20:10:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"YML formatting fix","shortMessageHtmlLink":"YML formatting fix"}},{"before":"371ddad784f3e89b7c3f7d33f1c798127f435e31","after":"1a6b06881a4ab423631e571cb48222509d289fa2","ref":"refs/heads/feature-docs","pushedAt":"2024-03-02T20:07:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"YML formatting fix","shortMessageHtmlLink":"YML formatting fix"}},{"before":"b1b2e851a3ca31e6248410649f51a891ce01431e","after":"371ddad784f3e89b7c3f7d33f1c798127f435e31","ref":"refs/heads/feature-docs","pushedAt":"2024-03-02T20:06:36.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"YML formatting fix","shortMessageHtmlLink":"YML formatting fix"}},{"before":"d9130ffa3b2900b0022202657d8d9f6e82cbf38e","after":"b1b2e851a3ca31e6248410649f51a891ce01431e","ref":"refs/heads/feature-docs","pushedAt":"2024-03-02T20:04:24.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"michael-ford","name":null,"path":"/michael-ford","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/3802717?s=80&v=4"},"commit":{"message":"Bugfix in selecting mamba","shortMessageHtmlLink":"Bugfix in selecting mamba"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEPyf0igA","startCursor":null,"endCursor":null}},"title":"Activity ยท michael-ford/bakir"}