{"payload":{"pageCount":2,"repositories":[{"type":"Public","name":"beacon-production-prototype","owner":"EGA-archive","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":1,"starsCount":0,"forksCount":0,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-07-18T17:33:29.785Z"}},{"type":"Public","name":"beacon-verifier-v2","owner":"EGA-archive","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-07-17T07:44:19.216Z"}},{"type":"Public","name":"crypt4gh","owner":"EGA-archive","isFork":false,"description":"GA4GH cryptographic tools","allTopics":["cryptography","ega","ga4gh","crg","cryptography-tools","ega-archive","crypt4gh"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":1,"starsCount":14,"forksCount":12,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-07-11T14:51:36.971Z"}},{"type":"Public","name":"beacon2-ri-api","owner":"EGA-archive","isFork":false,"description":"Beacon v2 Reference Implementation (API)","allTopics":[],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":2,"issueCount":13,"starsCount":14,"forksCount":36,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-07-10T10:34:07.607Z"}},{"type":"Public","name":"beacon-ri-documentation","owner":"EGA-archive","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"TypeScript","color":"#3178c6"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-26T15:56:02.676Z"}},{"type":"Public","name":"sarek-IMPaCT-data-QC","owner":"EGA-archive","isFork":true,"description":"Implementation of the IMPaCT-data quality control workflow for WES data in nf-core/sarek workflow. Which is an analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing.","allTopics":[],"primaryLanguage":{"name":"Nextflow","color":"#3ac486"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":391,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-25T07:32:24.798Z"}},{"type":"Public","name":"LocalEGA","owner":"EGA-archive","isFork":false,"description":"A federated storage for sensitive data","allTopics":["elixir","ega","crg","localega","crypt4gh","ega-archive"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":1,"starsCount":7,"forksCount":16,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-14T10:24:19.559Z"}},{"type":"Public","name":"ega-biomongo-tools","owner":"EGA-archive","isFork":false,"description":"BioMongoDB is envisioned as a MongoDB database to facilitate the storage of information derived from various initiatives within the BioTeam.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-10T12:09:29.256Z"}},{"type":"Public","name":"beacon2-ri-tools-v2","owner":"EGA-archive","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":4,"starsCount":1,"forksCount":2,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-28T13:24:47.959Z"}},{"type":"Public","name":"FEGA-Portals","owner":"EGA-archive","isFork":false,"description":"Repository to track issues about FEGA Submission (UI & API) and Helpdesk portals","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Creative Commons Attribution Share Alike 4.0 International","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-13T14:11:56.498Z"}},{"type":"Public","name":"EuCanImage-FHIR","owner":"EGA-archive","isFork":false,"description":"EuCanImage FHIR ETL","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-24T13:02:26.910Z"}},{"type":"Public","name":"LocalEGA-distribution","owner":"EGA-archive","isFork":false,"description":"Distribution system for a Federated EGA node","allTopics":[],"primaryLanguage":{"name":"C","color":"#555555"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-19T14:14:00.579Z"}},{"type":"Public","name":"ega-download-client","owner":"EGA-archive","isFork":false,"description":"A Python-based EGA download client","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":3,"issueCount":13,"starsCount":92,"forksCount":52,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-03T20:57:44.852Z"}},{"type":"Public","name":"beacon2-ri-api-images","owner":"EGA-archive","isFork":true,"description":"Beacon v2 Images Reference Implementation (API)","allTopics":[],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":36,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-03-24T17:06:58.693Z"}},{"type":"Public","name":"FEGA-onboarding","owner":"EGA-archive","isFork":false,"description":"Collection of onboarding materials for establishing a Federated EGA Node.","allTopics":["elixir","ega","crg","ebi","crypt4gh","ega-archive","federated-ega"],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":8,"starsCount":0,"forksCount":15,"license":"Creative Commons Attribution Share Alike 4.0 International","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-02-23T14:34:53.682Z"}},{"type":"Public","name":"crypt4gh-rust","owner":"EGA-archive","isFork":false,"description":"Rust implementation for the Crypt4GH encryption format","allTopics":["cryptography","ega","ga4gh","crg","cryptography-tools","ega-archive","crypt4gh"],"primaryLanguage":{"name":"Rust","color":"#dea584"},"pullRequestCount":0,"issueCount":0,"starsCount":5,"forksCount":2,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-01-31T23:32:18.862Z"}},{"type":"Public","name":"beacon2-ri-ui","owner":"EGA-archive","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-01-11T14:37:05.538Z"}},{"type":"Public","name":"refgenDetector","owner":"EGA-archive","isFork":false,"description":"Tool to infer the human reference genome used to creat an alignment file. ","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-11-16T09:52:47.117Z"}},{"type":"Public","name":"LocalEGA-inbox","owner":"EGA-archive","isFork":false,"description":"OpenSSH dropbox, with remote user credentials and notifications for file system events","allTopics":[],"primaryLanguage":{"name":"Dockerfile","color":"#384d54"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-11-15T23:03:37.756Z"}},{"type":"Public","name":"EGA-auth","owner":"EGA-archive","isFork":false,"description":"Linux NSS module for authentication of Federated EGA users","allTopics":[],"primaryLanguage":{"name":"C","color":"#555555"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-10-20T14:21:40.604Z"}},{"type":"Public","name":"beacon2-ri-api-cancer","owner":"EGA-archive","isFork":true,"description":"Beacon v2 Cancer Reference Implementation (API)","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":36,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-10-03T09:34:04.677Z"}},{"type":"Public","name":"beacon2-ri-tools","owner":"EGA-archive","isFork":false,"description":"Beacon v2 Reference Implementation (Data ingestion tools)","allTopics":["bioinformatics","mongodb","genomics","phenotypic","reference-implementation","bff","phenopacket","ega-archive","beacon-v2","beacon-friendly-format"],"primaryLanguage":{"name":"Perl","color":"#0298c3"},"pullRequestCount":1,"issueCount":1,"starsCount":7,"forksCount":9,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-08-08T14:14:20.704Z"}},{"type":"Public","name":"ega-zuulproxy","owner":"EGA-archive","isFork":false,"description":"A front end for the EGA data API. Required for ELIXIR integration. Provides Load Balancing, Traffic Shaping, Automated Retries.","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":1,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-06-20T18:31:54.346Z"}},{"type":"Public","name":"ega-quickview","owner":"EGA-archive","isFork":false,"description":"FUSE file system to access EGA files securely and remotely","allTopics":[],"primaryLanguage":{"name":"C","color":"#555555"},"pullRequestCount":0,"issueCount":0,"starsCount":3,"forksCount":0,"license":"GNU Lesser General Public License v2.1","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-05-12T17:02:35.005Z"}},{"type":"Public","name":"beacon-v2","owner":"EGA-archive","isFork":true,"description":"Unified repository for the GA4GH Beacon v2 API standard","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":19,"license":"Creative Commons Zero v1.0 Universal","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-05-10T14:11:22.284Z"}},{"type":"Public","name":"beacon-verifier","owner":"EGA-archive","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Rust","color":"#dea584"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-05-10T14:02:20.046Z"}},{"type":"Public","name":"ega-data-api","owner":"EGA-archive","isFork":false,"description":"","allTopics":["java","ega","ega-archive"],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":16,"issueCount":7,"starsCount":2,"forksCount":3,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-04-14T17:48:39.356Z"}},{"type":"Public","name":"ega-fuse-client","owner":"EGA-archive","isFork":false,"description":"A Java/JNR based FUSE virtual file system client to provide access to authorized EGA files via the EGA Data REST API (v3)","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":1,"issueCount":0,"starsCount":6,"forksCount":6,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-01-09T16:01:23.025Z"}},{"type":"Public","name":"star2xml","owner":"EGA-archive","isFork":false,"description":"The star2xml tool eases the process of XML creation prior metadata programmatic submission to the European Genome-phenome Archive (EGA).","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":0,"starsCount":1,"forksCount":0,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-08-09T10:35:04.557Z"}},{"type":"Public","name":"ServicesRegistry","owner":"EGA-archive","isFork":false,"description":"Registry for dispatching HTTP requests to a fixed list of services.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-06-23T12:57:33.622Z"}}],"repositoryCount":54,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"EGA-archive repositories"}