Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Had any scripts to pick the distinctive SNP site from vireo file GT_donors.vireo.vcf.gz gene to distinguish multiple sample using PCR experiment #73

Open
honghh2018 opened this issue Sep 7, 2022 · 1 comment
Open

Had any scripts to pick the distinctive SNP site from vireo file GT_donors.vireo.vcf.gz gene to distinguish multiple sample using PCR experiment #73

honghh2018 opened this issue Sep 7, 2022 · 1 comment

Comments

@honghh2018
Copy link

Hi development,
There are question about the genes selected to demultiplex the mixed samples using PCR experiment. the result files "GT_donors.vireo.vcf.gz" had been generated by vireo pipeline, however i want to choose some significant different allele site responding gene to PCR experiment to confirm it relate with certain sample.

Had any advice for this issue ?

Best,
Hanhuihong
@hxj5
Copy link
Collaborator

hxj5 commented Sep 11, 2022

Hi, I suppose this vireo manual could be what you want.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@honghh2018 @hxj5