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Constraint-based optimization algorithms from the Chandrasekaran Lab

This repository contains code that can be used to integrate multiple -omics data and analyze constraint-based metabolic reconstructions.

Dependencies

Many functions in this repository require the cobratoolbox or cobrapy libraries for specific modeling tasks. Additionally, the Gurobi solver is required for optimization problems.

Contributing

Contributions are welcome! Please read the contributions guide to get started. Also feel free to submit bugs, feature requests, and pull requests.