bacteria
Here are 203 public repositories matching this topic...
A simple pipeline for bacterial assembly and quality control
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Jul 4, 2024 - Nextflow
Hardware and software for accessible, extensible, and scalable bioreactors. Built on Raspberry Pi.
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Jul 3, 2024 - Python
Bacterial Assembly and Antimicrobial Resistance Genes In NextFlow
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Jul 3, 2024 - Nextflow
PopPUNK 👨🎤 (POPulation Partitioning Using Nucleotide Kmers)
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Jul 5, 2024 - Python
BSR-Based Allele Calling Algorithm
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Jul 2, 2024 - HTML
Accurate, resource-frugal and deterministic DNA sequence classifier.
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Jul 2, 2024 - Python
Build a partitioned pangenome graph from microbial genomes
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Jul 5, 2024 - Python
This repo serves as a guide for the BYU Image Segmentation group. We are attempting to identify structures in images created by Electron cryotomography.
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Jul 3, 2024 - Jupyter Notebook
SEER, reimplemented in python 🐍🔮
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Jun 25, 2024 - Python
🦠📇 Microbial genomes-to-report pipeline
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Jun 20, 2024 - Python
A nextflow pipeline for performing bacterial RNA-Seq data analysis.
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Jun 19, 2024 - Nextflow
Rapid & standardized annotation of bacterial genomes, MAGs & plasmids
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Jun 14, 2024 - Python
GET_HOMOLOGUES: a versatile software package for pan-genome analysis
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Jun 13, 2024 - Perl
A library to get information on organisms and UniProt identifiers. This includes growth temperature, growth ph, pfam domains, taxonomic lineage.
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Jun 11, 2024 - Python
Data processing scripts for analysis of targeted metagenomics sequencing data. Intended for use with multiplexed Illumina short-read data generated after enrichment.
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Jun 11, 2024 - Python
Neural Net Bacteria - Creating bacterial colonies that will learn to play Pong, Go, DOOM, and encode/decode signals
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Jun 7, 2024
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