Python libraries for loading, running and packaging bioimage.io models
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Updated
Jul 18, 2024 - Jupyter Notebook
Python libraries for loading, running and packaging bioimage.io models
Scripts for use with BIOMERO
BIOMERO - A python library for easy connecting between OMERO (jobs) and a Slurm cluster
Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.
Zarr Homepage
Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata
Package providing bioimaging functionality using TileDB. Source of the tiledb-bioimg Python package.
R package for visualization of highly multiplexed imaging data
Discover, install, and share napari plugins
3D volume rendering software for fluorescence microscopy
C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.
Analysis of variance (ANOVA) is a collection of statistical models and their associated estimation procedures (such as the "variation" among and between groups) used to analyze the differences among means.
Slides for a presentation about contributing to the napari community
SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.
TileDB BioImaging plugin for Napari
Visualisation software for imaging mass cytometry data
Rust library for reading imaging mass cytometry (IMC) data stored in .mcd files.
Predicting successful CME events using only clathrin markers. 🦠📈
Python code that I used in my blog posts on the Zarr file format.
Add a description, image, and links to the bioimaging topic page so that developers can more easily learn about it.
To associate your repository with the bioimaging topic, visit your repo's landing page and select "manage topics."