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Spatially Explicit Integrated Modeling System --- open-source, cross-platform, and high performance computation
An R package for simulating Generalised Management Strategy Evaluation
Large-scale implementation (using the Split-Apply-Combine paradigm) of different metabolic adaptation models of species in a 2-species co-culture, based on a Consumer-Resource modeling framework in a Serial-Dilution setup, where species compete for nutrients that are supplied periodically.
Automated Translation of Network Data into Declaration Files Compatible with LIM and limSolve
General-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics
A unified interface for simulations of the Bio-Energetic model on food webs
APES (Atmosphere - Plant - Exchange Simulator) codes in Matlab
Updated R code for Nunes & Pearson, 2017 in Journal of Biogeography. Nunes, L. A. and Pearson, R. G. (2017), A null biogeographical test for assessing ecological niche evolution. Journal of Biogeography. doi: 10.1111/jbi.12910
Supplemental code for the paper: "Seed dispersal as a search strategy: dynamic and fragmented landscapes select for multi-scale movement strategies in plants" in Movement Ecology 2021
System to simulate individual interactions and capture ecological and evolutionary dynamics
Environnement de simulation multi-agent avec un paradigme écologoiquement valide. Basé sur SimplePlaygrounds.
A Literature Review of Questionable Research Practices in Ecological Modelling for Decisions
Data used in: "Estudo da distribuição do gênero chamaeza no estado do Rio de Janeiro"
Code for 'Finding missing links in interaction networks' paper
Various work with Integrated Monitoring in Bird Conservation Regions (IMBCR) data and analyses
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