Protecting from Envelope Stress: Variations on the Phage-shock-protein theme
-
Updated
Jul 9, 2018
Protecting from Envelope Stress: Variations on the Phage-shock-protein theme
Pipeline which make phylogeny with sequence of different sample
A (not so) basic course of comparative biology.
Phlorest phylogeny derived from Sagart et al. 2019 'Dated language phylogenies shed light on the ancestry of Sino-Tibetan'
a ITIS search wrapper to be used with Petrie
phyDBSCAN: Building alternative phylogenetic trees using DBSCAN and Robinson and Foulds distance
Real-time analytics for large-scale classification of viral genome sequences using Feature Frequency Profile method
Phlorest phylogeny derived from De Filippo et al. 2012 'Bringing together linguistic and genetic evidence to test the Bantu expansion'
Make phylogenetic trees and lineages from the NCBI Taxonomy database
Light phylogeny API for Rust
🌲👻 Testing the phylogenetic reality of the living fossil with an EDBMM
Methods for the analyses described in Álvarez-Carretero, et al. 2019 (https://doi.org/10.1093/sysbio/syz015)
Building a fully automized pipeline for phylogenomic analyses based on the GEMOMA annotation pipeline
Context-Aware Phylogenetic Trees for Phylogeny-based Taxonomy Visualization
Companion repository to the Internalin P Listeria manuscript | HardyLab & JRaviLab
This is a pipeline that can be used to generate a phylogenetic tree, including a heatmap showing carriage of specific genes, the assigned phylogroup of each strain, and the names of each strain. It should now be capable of working with any sort of strains - currently I'm working on making small improvements.
Phlorest phylogeny derived from Birchall et al. 2016 'A combined comparative and phylogenetic analysis of the Chapacuran language family'
XGBoost implementation for bacteria family identification
Repo dedicated to bioinformatics where genomic files are processed for sequence analysis, alignment, and more.
Add a description, image, and links to the phylogeny topic page so that developers can more easily learn about it.
To associate your repository with the phylogeny topic, visit your repo's landing page and select "manage topics."