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More details regarding taxonomy DB #6

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aistBMRG opened this issue Jun 12, 2024 · 2 comments
Open

More details regarding taxonomy DB #6

aistBMRG opened this issue Jun 12, 2024 · 2 comments

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@aistBMRG
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Thanks for developing this tool -- I am eager to try it out.

Now, it seems that a taxonomy database is a requirement for laca init. Would it be possible to clarify the format of this database (e.g., fasta with taxonomy strings in the sequence header ...?) -- I searched for some information but could not readily find what I was looking for?

Thanks!

Dieter

@yanhui09
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You only need to define the path database_dir (where you want to place the database file) in the config.yaml. And run the workflow. It will install the database for the first use. ;)

@aistBMRG
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Thanks for the information. I will proceed accordingly.

Best.

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