AMICI v0.15.0

Features

• Improved logging by @dweindl in #1907

  For Python: Don't print messages to stdout, but collect them in ReturnData
  and forward them to python logging, making it easier to filter specific
  messages or to disable output completely. Messages are also available via
  ReturnData.messages.

  breaking change for C++ interface:
  Messages aren't printed to stdout by default, but are collected in
  ReturnData. The user has to decide what to do with them.

• MultiArch docker build by @FFroehlich in #1903

• Added cmake target for cmake-format by @dweindl in #1909

• Updated clang-format style, fixed clang-format target by @dweindl in #1908

• Subsetting ReturnData fields by ID via ReturnDataView.by_id by @dweindl in #1911 #1916

Fixes

• PEtab import: fixed handling of fixed parameters for rule targets by @dweindl in #1915
• Fixed compiler warnings for matlab interface by @dweindl in #1919
• Fixed pandas DeprecationWarning for Series.iteritems() by @dweindl in #1921
• Fixed circular import in amici.petab_import_pysb by @dweindl in #1922
• Fixed 'operator ==' swig warning by @dweindl in #1923
• Prevent swig4.0.1 segfault by @dweindl in #1924

Full Changelog: v0.14.0...v0.15.0