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@AndersenLab

Andersen Lab

Johns Hopkins University

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  1. CAENDR CAENDR Public

    HTML 4 3

Repositories

Showing 10 of 176 repositories
  • annotation-nf Public

    Annotate VCF with snpeff and bcsq

    AndersenLab/annotation-nf’s past year of commit activity
    Nextflow 1 1 4 0 Updated Jul 18, 2024
  • concordance-nf Public
    AndersenLab/concordance-nf’s past year of commit activity
    R 0 MIT 2 0 0 Updated Jul 18, 2024
  • trim-fq-nf Public
    AndersenLab/trim-fq-nf’s past year of commit activity
    Nextflow 0 MIT 1 2 0 Updated Jul 18, 2024
  • post-gatk-nf Public

    Subset isotype-only vcf, build tree etc. steps after variant calling and isotype assignment

    AndersenLab/post-gatk-nf’s past year of commit activity
    Nextflow 1 1 0 0 Updated Jul 18, 2024
  • wi-gatk Public

    The new GATK-based pipeline for wild isolate C. elegans strains

    AndersenLab/wi-gatk’s past year of commit activity
    Nextflow 1 3 6 0 Updated Jul 18, 2024
  • Ct_pop_gen_project Public
    AndersenLab/Ct_pop_gen_project’s past year of commit activity
    R 0 0 0 0 Updated Jul 18, 2024
  • alignment-nf Public

    A nextflow pipeline for genome sequences alignment

    AndersenLab/alignment-nf’s past year of commit activity
    Nextflow 1 MIT 0 1 0 Updated Jul 18, 2024
  • easyXpress Public

    easyXpress is an R package for the analysis and visualization of high-throughput image-based nematode data

    AndersenLab/easyXpress’s past year of commit activity
    HTML 2 MIT 2 11 0 Updated Jul 17, 2024
  • CAENDR Public
    AndersenLab/CAENDR’s past year of commit activity
    HTML 4 MIT 3 0 3 Updated Jul 17, 2024
  • cellprofiler-nf Public

    A nextflow pipeline to run CellProfiler pipelines on raw images and process output

    AndersenLab/cellprofiler-nf’s past year of commit activity
    Nextflow 1 MIT 2 6 (1 issue needs help) 1 Updated Jul 12, 2024
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