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put the human's inner ear cells in order by the level of gene expression #688

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gear-portal-team opened this issue Apr 18, 2024 · 4 comments
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@gear-portal-team
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From: Niusha Kasiri

Email: [email protected]

Server IP: 10.142.0.16

Msg: Hello dear manager,
I want to put the human's inner ear cells (IHC, OHC, VHC,...) in order by the level of gene expression. However, I couldn't figure out how to to that or didn't find any table about it.
Can you please help me regarding this matter and guide me?
Thank you in advance.

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@adkinsrs
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In the dataset curator (single and multigene) for v2, you can sort by columns (i.e. cell type) after the initial plot and save the curation.

For whomever wants to answer.

@jorvis
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jorvis commented Apr 23, 2024

So they can't do it currently, but this is a feature coming soon.

@adkinsrs
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adkinsrs commented Apr 23, 2024

For the multigene curator only in v1 you can sort before generating the plot but seems to user wants to sort based on what they see

For the dataset curator in v1, there is a drag-n-drop sortable after you plot, which is restricted to categorical data. You sort by the category group rather than by specific columns, so if you use the same category group for something like "X-axis" and "Facet-column" it adjusts the order of both. See "Order" section in bottom-left of below image

Screenshot 2024-04-23 at 11 52 24 AM

@DanLesperance
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Reached out to user and let them know this feature is coming and that I'll be in touch when v2 comes live

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