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mcxtrace-testsuite

mcxtrace-testsuite #22

name: mcxtrace-testsuite
on:
schedule:
- cron: '00 01 * * *' # 01:00 every day
workflow_dispatch:
inputs:
manual-debugging:
type: boolean
description: Launch manual debugging tmate for inspection (automatic in case of errors)
default: false
jobs:
build:
strategy:
fail-fast: false
matrix:
include:
- { os: ubuntu-latest, CC: clang, CXX: clang++, python: '3.11' }
name: ${{ matrix.os }}.${{ matrix.CC }}.python-${{ matrix.python }}
runs-on: ${{ matrix.os }}
env:
CC: ${{ matrix.CC }}
CXX: ${{ matrix.CXX }}
defaults:
run:
shell: bash -el {0}
steps:
- name: Checkout
uses: actions/checkout@v4
with:
path: src
- name: Setup python
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python }}
- name: Setup Bison (macOS)
id: setup-flex-bison-macos
if: runner.os == 'macOS'
run: |
brew install bison flex
- name: Setup Bison (Windows)
id: setup-flex-bison-Windows
if: runner.os == 'Windows'
run: |
choco install winflexbison3
- name: Setup OpenMPI (Linux)
id: setup-openmpi-nexus-linux-gsl-xraylib
if: runner.os == 'Linux'
run: |
sudo apt -y install libopenmpi-dev libnexus-dev curl libgsl-dev libxrl-dev
sudo curl -O https://packages.mccode.org/debian/dists/stable/main/binary-amd64/mcpl-1.6.2-deb64.deb
sudo dpkg -i mcpl-1.6.2-deb64.deb
sudo apt-get -f install
- name: Setup OpenMPI (macOS-12,13)
id: setup-openmpi-macos
if: runner.os == 'macOS' && matrix.os != 'macos-11'
run: |
set -e
set -u
set -x
brew install openmpi
- name: Check versions
id: version-checks
run: |
which python3
python3 --version
which cmake
cmake --version
#NB: bison and flex in path are actually too old, on mac we
#inject these via a brew keg later
- name: Configure build and install mcxtrace
id: mcxtrace-install
run: |
if [ "$RUNNER_OS" == "macOS" ]; then export SDKROOT=$(xcrun --sdk macosx --show-sdk-path); fi
set -e
set -u
set -x
mkdir build_mcxtrace
cd build_mcxtrace
export EXTRA_ARGS_FOR_CMAKE=""
if [ "$RUNNER_OS" == "macOS" ]; then export EXTRA_ARGS_FOR_CMAKE="-DBISON_EXECUTABLE=/usr/local/opt/bison/bin/bison -DFLEX_EXECUTABLE=/usr/local/opt/flex/bin/flex"; fi
if [ "$RUNNER_OS" == "Linux" ]; then export EXTRA_ARGS_FOR_CMAKE="-DNEXUSLIB=/usr/lib -DNEXUSINCLUDE=/usr/include/nexus"; fi
cmake \
-DCMAKE_INSTALL_PREFIX=../install_mcxtrace \
-S ../src \
-G "Unix Makefiles" \
-DMCVERSION="3.99.99" \
-DMCCODE_BUILD_CONDA_PKG=ON \
-DBUILD_SHARED_LIBS=ON \
-DCMAKE_INSTALL_LIBDIR=lib \
-DCMAKE_BUILD_TYPE=Release \
-DBUILD_MCXTRACE=ON \
-DMCCODE_USE_LEGACY_DESTINATIONS=OFF \
-DBUILD_TOOLS=ON \
-DENABLE_COMPONENTS=ON \
-DENSURE_MCPL=ON \
-DENSURE_NCRYSTAL=OFF \
-DENABLE_CIF2HKL=OFF \
-DENABLE_NEUTRONICS=OFF \
${EXTRA_ARGS_FOR_CMAKE}
cmake --build . --config Release
cmake --build . --target install --config Release
export MCXTRACE_EXECUTABLE="mcxtrace"
export MXRUN_EXECUTABLE="mxrun"
if [ "$RUNNER_OS" == "Windows" ];
then
export MCXTRACE_EXECUTABLE="mcxtrace.exe"
export MXRUN_EXECUTABLE="mxrun.bat"
fi
test -f "../install_mcxtrace/bin/${MCXTRACE_EXECUTABLE}"
test -f "../install_mcxtrace/bin/${MXRUN_EXECUTABLE}"
test -f "../install_mcxtrace/share/mcxtrace/tools/Python/mccodelib/__init__.py"
test -d "../install_mcxtrace/share/mcxtrace/resources/data"
echo *******************************************************************************
echo Resulting mccode_config.json:
echo *******************************************************************************
cat ../install_mcxtrace/share/mcxtrace/tools/Python/mccodelib/mccode_config.json
echo *******************************************************************************
- name: Pip install various
id: pip-install
run: |
set -e
set -u
set -x
python3 -mpip install PyYAML ply McStasscript
if [ "$RUNNER_OS" != "Windows" ];
then
python3 -mpip install ncrystal
fi
- name: Test suite, 2-core MPI
id: test-suite
run: |
set -e
set -u
set -x
export PATH=$PWD/install_mcxtrace/bin/:$PATH
mkdir run_test-suite && cd run_test-suite
mxtest --testdir $PWD --mpi=2 --suffix ${{ matrix.os }}
- name: 'Tar output files'
id: tar-package
if: always()
run: |
set -e
set -u
set -x
tar cvfz mcxtrace-${{ matrix.os }}.${{ matrix.CC }}.python-${{ matrix.python }}_output.tgz run_*
- name: 'Upload Artifact'
id: tar-upload
uses: actions/upload-artifact@v4
if: always()
with:
name: mcxtrace-artefacts-${{ matrix.os }}.${{ matrix.CC }}.python-${{ matrix.python }}
path: "mcxtrace-${{ matrix.os }}.${{ matrix.CC }}.python-${{ matrix.python }}_output.tgz"
- name: Setup tmate session for manual debugging
uses: mxschmitt/action-tmate@v3
if: always() && (inputs.manual-debugging == true && steps.tar-package.outcome != 'success')
with:
limit-access-to-actor: true