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31 Open 173 Closed
31 Open 173 Closed
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Issues list

Update gtdbtk 220
#352 opened Jul 14, 2024 by matinnuhamunada
Server port: Auto-assign ports for database with report.
#351 opened Jul 9, 2024 by SPBorkar04
How to use Custom input directory? good first issue Good for newcomers question Further information is requested
#349 opened Jun 12, 2024 by 540889956
@matinnuhamunada
7
Fail to build database when multiple antiSMASH version result are present
#346 opened May 1, 2024 by matinnuhamunada
Run fails on Antismash "pip is looking at multiple versions of antismash to determine which version is compatible with other requirements."
#341 opened Apr 26, 2024 by artfet
1
ARTS summary table showed wrong values for some of the genome_ids
#330 opened Feb 26, 2024 by matinnuhamunada
Feature request, make GTDB API resource available offline
#312 opened Dec 19, 2023 by matinnuhamunada
Running bgcflow on cluster
#308 opened Dec 6, 2023 by matinnuhamunada
Defining local rules
#307 opened Dec 6, 2023 by matinnuhamunada
GTDBtk offline mode fails
#303 opened Nov 27, 2023 by matinnuhamunada
Analyse subsequence of genome
#302 opened Nov 23, 2023 by FriederikeBiermann
2
Use environment variables to point for resources
#301 opened Nov 9, 2023 by matinnuhamunada
Speed up emapper annotation
#293 opened Oct 11, 2023 by matinnuhamunada
bgcflow wrapper failed to read the resource config file on python 3.12
#287 opened Oct 5, 2023 by matinnuhamunada
Shell error in downstream_bgc_prep_selection rule: Argument list too long bug Something isn't working
#286 opened Oct 2, 2023 by OmkarSaMo
Pandas future warning
#284 opened Sep 27, 2023 by matinnuhamunada
Feature request phylogenetic analysis subworkflow
#261 opened Jul 15, 2023 by OmkarSaMo
2
Add sketch size parameter to MASH
#259 opened Jul 13, 2023 by OmkarSaMo
Feat: Pangenome graph module
#255 opened Jul 7, 2023 by OmkarSaMo
2
Link to SMBP website
#252 opened Jul 2, 2023 by OmkarSaMo
Suggestions for documentation documentation Improvements or additions to documentation
#245 opened Jun 9, 2023 by OmkarSaMo
3 of 6 tasks
18
New rules: BAGEL
#241 opened Jun 2, 2023 by OmkarSaMo
2
BGC Feat: BiGSCAPE HTML report is empty
#232 opened Mar 17, 2023 by OmkarSaMo
Suggestions for the reports
#231 opened Mar 9, 2023 by OmkarSaMo
Integrated GTDB summary table
#216 opened Jan 17, 2023 by OmkarSaMo
ProTip! Updated in the last three days: updated:>2024-07-15.