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@OHDSI

Observational Health Data Sciences and Informatics

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  1. CommonDataModel CommonDataModel Public

    Definition and DDLs for the OMOP Common Data Model (CDM)

    HTML 858 443

  2. Vocabulary-v5.0 Vocabulary-v5.0 Public

    Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.

    PLpgSQL 206 73

  3. Atlas Atlas Public

    ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

    JavaScript 259 127

  4. Cyclops Cyclops Public

    Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

    C++ 37 32

  5. CohortMethod CohortMethod Public

    An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.

    R 79 57

  6. PatientLevelPrediction PatientLevelPrediction Public

    An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

    HTML 182 88

Repositories

Showing 10 of 297 repositories
  • GIS Public
    OHDSI/GIS’s past year of commit activity
    R 8 Apache-2.0 9 125 (13 issues need help) 1 Updated Jul 19, 2024
  • ClinicalCharacteristics Public

    [under development] table shell approach to OMOP characterization

    OHDSI/ClinicalCharacteristics’s past year of commit activity
    R 0 Apache-2.0 0 17 0 Updated Jul 19, 2024
  • Characterization Public

    Various types of characterizations of a target and outcome cohort.

    OHDSI/Characterization’s past year of commit activity
    R 3 5 6 3 Updated Jul 19, 2024
  • ETL-LambdaBuilder Public

    CDM Builder leveraging AWS Lambda

    OHDSI/ETL-LambdaBuilder’s past year of commit activity
    C# 12 Apache-2.0 15 3 0 Updated Jul 19, 2024
  • Strategus Public

    [Under development] An R packages for coordinating and executing analytics using HADES modules

    OHDSI/Strategus’s past year of commit activity
    R 6 10 27 5 Updated Jul 19, 2024
  • CohortIncidence Public

    Contains the Java and R assets to perform Incidence calculations on a CDM

    OHDSI/CohortIncidence’s past year of commit activity
    R 5 2 5 0 Updated Jul 19, 2024
  • drat Public

    drat repository for OHDSI R packages

    OHDSI/drat’s past year of commit activity
    5 7 0 0 Updated Jul 19, 2024
  • Vocabulary-v5.0 Public

    Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.

    OHDSI/Vocabulary-v5.0’s past year of commit activity
    PLpgSQL 206 Unlicense 73 219 21 Updated Jul 19, 2024
  • ArachneExecutionEngine Public

    Arachne Execution Engine is a component used to execute remote SQL or R code. It is used by both Arachne Data Node as well as WebAPI

    OHDSI/ArachneExecutionEngine’s past year of commit activity
    PLpgSQL 7 7 6 4 Updated Jul 19, 2024
  • Ares Public

    A Research Exploration System

    OHDSI/Ares’s past year of commit activity
    Vue 12 Apache-2.0 4 40 2 Updated Jul 19, 2024