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Merge pull request #9 from SystemsGenetics/develop
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Python version of FUNC-E
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spficklin authored Oct 21, 2021
2 parents d329855 + f3680d7 commit d46ae15
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5 changes: 5 additions & 0 deletions .gitignore
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demo/demo_run.FUNC-E.cluster_terms.tsv
demo/demo_run.FUNC-E.clusters.tsv
demo/demo_run.FUNC-E.enriched_terms.tsv
__pycache__

13 changes: 13 additions & 0 deletions Dockerfile
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FROM ubuntu:18.04

# install system dependencies
RUN apt-get update -qq && apt-get install -qq -y curl git python3-dev python3-pip && ln -s /usr/bin/python3 python

#changing working directory in Docker container
WORKDIR /app

# copy data from local into Docker container
ADD . /app/

# install python dependencies
RUN pip3 install -r requirements.txt
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