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Example functions to retrieve markup information from 3D Slicer .mrb files

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3DSlicer_open_mrb_extract_markup_info

Example functions to retrieve markup information from 3D Slicer .mrb files

Functions available:

  1. open_file_get_points_fcsv

    • extracts point coordinates if file in .mrb is .fcsv
  2. open_file_get_points

    • extracts point coordinates from .mrk.json
  3. open_file_get_length

    • extracts length from .mrk.json
  4. open_file_get_area

    • extracts area from .mrk.json
  5. open_file_get_angle

    • extracts angle from .mrk.json

Example code

open_mrb_get_markup_info_pseudocode.py

Has example with for loop that opens all .mrb files in folder and saves markup information into dictionary and dataframe

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Example functions to retrieve markup information from 3D Slicer .mrb files

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