Skip to content

amatov/GeneralizedSparrowCriterion

BranchesTags

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

29 Commits
Gauss2D11center.m
Gauss2D11center.m
 
 
LifeTest.m
LifeTest.m
 
 
README.md
README.md
 
 
SpeckTackle.png
SpeckTackle.png
 
 
bessToGauss.m
bessToGauss.m
 
 
compFits.m
compFits.m
 
 
critDist.m
critDist.m
 
 
cropImage.m
cropImage.m
 
 
cropStack.m
cropStack.m
 
 
evalSigma.m
evalSigma.m
 
 
fitDistCurve.m
fitDistCurve.m
 
 
fit_ex.m
fit_ex.m
 
 
fit_simp.m
fit_simp.m
 
 
fit_simp_neg.m
fit_simp_neg.m
 
 
fsmPrepCheckDistance.m
fsmPrepCheckDistance.m
 
 
fsmPrepCheckInfo.m
fsmPrepCheckInfo.m
 
 
fsmPrepConfirmLoopSpeckles.m
fsmPrepConfirmLoopSpeckles.m
 
 
fsmPrepConfirmSpeckles.m
fsmPrepConfirmSpeckles.m
 
 
fsmPrepMainSecondarySpeckles.m
fsmPrepMainSecondarySpeckles.m
 
 
fsmPrepScaleSpace.m
fsmPrepScaleSpace.m
 
 
fsmPrepSubstructMaxima.m
fsmPrepSubstructMaxima.m
 
 
gauss2Djac.m
gauss2Djac.m
 
 
getFilenameBody.m
getFilenameBody.m
 
 
getSpeckleNum.m
getSpeckleNum.m
 
 
minDistance.m
minDistance.m
 
 
minDistanceSubstruct.m
minDistanceSubstruct.m
 
 
noLocMaxImage.m
noLocMaxImage.m
 
 
psf2D1.m
psf2D1.m
 
 
relativeIntencity.m
relativeIntencity.m
 
 
successRate.m
successRate.m
 
 
successRateA.m
successRateA.m
 
 
twoFigures.m
twoFigures.m
 
 
twoGK.m
twoGK.m
 
 

Repository files navigation

The Matlab code I wrote for the solution of the Generalized Sparrow Criterion between two point-spread functions in noisy image data for the publications:

Pascal Vallotton, Aaron Ponti, Clare Waterman, Ted Salmon, Gaudy Danuser "Recovery, Visualization, and Analysis of Actin and Tubulin Polymer Flow in Live Cells: A Fluorescent Speckle Microscopy Study (2003)" https://cell.com/action/showPdf?pii=S0006-3495%2803%2974564-0

Aaron Ponti, Alex Matov, Mike Adams, Steph Gupton, Clare Waterman, Gaudy Danuser "Periodic Patterns of Actin Turnover in Lamellipodia and Lamellae of Migrating Epithelial Cells Analyzed by Quantitative Fluorescent Speckle Microscopy (2005)" https://researchgate.net/publication/7660807_Periodic_Patterns_of_Actin_Turnover_in_Lamellipodia_and_Lamellae_of_Migrating_Epithelial_Cells_Analyzed_by_Quantitative_Fluorescent_Speckle_Microscopy

About

www.researchgate.net/publication/374166145_Matov_Resume_2024

Topics

inflection-point bessel-function intensity-curvature jacobian-matrix diffraction-limited-spots difference-of-gaussian scale-space-feature-detection resolution-limit low-snr fluorescent-speckle-microscopy point-spread-function-fitting objective-function-optimization generalized-sparrow-limit detection-success-rate change-of-sign-2nd-derivative airy-disk-modeling subresolution-cluster-fluorophores feature-fusion-due-to-noise computationally-inexpensive-detection

Resources

Readme
Activity

Stars

0 stars

Watchers

1 watching

Forks

0 forks
Report repository

Releases

No releases published

Packages

 
 
 

Languages