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athowes/README.md

Hi! I'm Adam, a Bayesian statistician primarily working with the Center for Forecasting and Outbreak Analytics at the CDC. Previously, I completed my PhD in statistics at Imperial College London. For more information, and my blog, see athowes.github.io. To give an idea about my work, see:

Repository Description
epidist An R package for estimating the time between events with interval censoring and right truncation
thesis My thesis, "Bayesian spatio-temporal methods for small-area estimation of HIV indicators", supervised by Seth Flaxman (Oxford, CS) and Jeff Eaton (Imperial, DIDE; Harvard, CCDD)
beyond-borders Evaluating the suitability of spatial adjacency for small-area estimation (arealutils)
multi-agyw Estimating HIV risk group proportions with a multinomial spatio-temporal model (multi.utils, UNAIDS)
naomi-aghq Improving approximate Bayesian inference methods for extended latent Gaussian models (inf.utils)
exp-growth Time-series methods for disease-agnostic metagenomic environmental threat detection
  • I'm always looking to improve at writing clear, concise, efficient, reproducible code. Any suggestions, let me know! I predominantly program in R. Over time, I'd like to become multilinual by learning Python (and maybe Julia?): advice welcome.
  • I'm currently reading: Trees, maps, and theorems, The Effective Manager, and miscellaneous resources about technical management, see reading.
  • You may be interested in these resources I've found useful, or what I'm learning about via tutorial.

Pinned Loading

  1. epinowcast/epidist epinowcast/epidist Public

    An R package for estimating epidemiological delay distributions

    R 9 3

  2. thesis thesis Public

    Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD, Imperial College London, 2023)

    TeX 13 1

  3. beyond-borders beyond-borders Public

    Evaluating the suitability of spatial adjacency for small-area estimation

    R 2 1

  4. multi-agyw multi-agyw Public

    Spatio-temporal estimates of HIV risk group proportions for AGYW across 13 priority countries in sub-Saharan Africa

    R 2 2

  5. naomi-aghq naomi-aghq Public

    Fast approximate Bayesian inference of HIV indicators using PCA adaptive Gauss-Hermite quadrature

    R 4 1

  6. exp-growth exp-growth Public

    Time-series methods for disease-agnostic metagenomic environmental threat detection

    R 4