JAX-powered Python package for exploratory analysis of binary data. This includes genotype data, binary images, and data sets used in ecology.
Note: this package is in early development stage.
- Source code: https://github.com/cbg-ethz/Jnotype
- Bug reports: https://github.com/cbg-ethz/Jnotype/issues
Note: The package has not reached a stable API yet. Frequent changes may appear
We recommend setting up a new virtual environment. You can install the package using PIP:
$ python -m pip install 'jnotype @ git+https://github.com/cbg-ethz/jnotype'However, this will install the CPU version of JAX. To use GPU, you may need to follow the official JAX installation tutorial.
Directory examples/ contains Quarto notebooks, which demonstrate basic functionalities of the package.