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poetry.lock
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# This file is automatically @generated by Poetry 1.7.1 and should not be changed by hand.
[[package]]
name = "atomicwrites"
version = "1.4.1"
description = "Atomic file writes."
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
files = [
{file = "atomicwrites-1.4.1.tar.gz", hash = "sha256:81b2c9071a49367a7f770170e5eec8cb66567cfbbc8c73d20ce5ca4a8d71cf11"},
]
[[package]]
name = "attrs"
version = "23.1.0"
description = "Classes Without Boilerplate"
optional = false
python-versions = ">=3.7"
files = [
{file = "attrs-23.1.0-py3-none-any.whl", hash = "sha256:1f28b4522cdc2fb4256ac1a020c78acf9cba2c6b461ccd2c126f3aa8e8335d04"},
{file = "attrs-23.1.0.tar.gz", hash = "sha256:6279836d581513a26f1bf235f9acd333bc9115683f14f7e8fae46c98fc50e015"},
]
[package.extras]
cov = ["attrs[tests]", "coverage[toml] (>=5.3)"]
dev = ["attrs[docs,tests]", "pre-commit"]
docs = ["furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-towncrier", "towncrier", "zope-interface"]
tests = ["attrs[tests-no-zope]", "zope-interface"]
tests-no-zope = ["cloudpickle", "hypothesis", "mypy (>=1.1.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
[[package]]
name = "bio"
version = "1.6.0"
description = "bio"
optional = false
python-versions = ">=3.7"
files = [
{file = "bio-1.6.0-py3-none-any.whl", hash = "sha256:38b14e11625ef233e1a3878c8b13253695e863bd997f94715c248b71612605d5"},
]
[package.dependencies]
biopython = ">=1.80"
gprofiler-official = "*"
mygene = "*"
pandas = "*"
pooch = "*"
requests = "*"
tqdm = "*"
[[package]]
name = "biopython"
version = "1.81"
description = "Freely available tools for computational molecular biology."
optional = false
python-versions = ">=3.7"
files = [
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{file = "biopython-1.81.tar.gz", hash = "sha256:2cf38112b6d8415ad39d6a611988cd11fb5f33eb09346666a87263beba9614e0"},
]
[package.dependencies]
numpy = "*"
[[package]]
name = "biothings-client"
version = "0.3.1"
description = "Python Client for BioThings API services."
optional = false
python-versions = ">=2.7"
files = [
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[package.dependencies]
requests = ">=2.3.0"
[package.extras]
caching = ["requests-cache (>=0.4.13)"]
dataframe = ["pandas (>=0.18.0)"]
jsonld = ["PyLD (>=0.7.2)"]
[[package]]
name = "certifi"
version = "2023.11.17"
description = "Python package for providing Mozilla's CA Bundle."
optional = false
python-versions = ">=3.6"
files = [
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[[package]]
name = "charset-normalizer"
version = "3.3.2"
description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet."
optional = false
python-versions = ">=3.7.0"
files = [
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version = "2.1.0"
description = "HTTP library with thread-safe connection pooling, file post, and more."
optional = false
python-versions = ">=3.8"
files = [
{file = "urllib3-2.1.0-py3-none-any.whl", hash = "sha256:55901e917a5896a349ff771be919f8bd99aff50b79fe58fec595eb37bbc56bb3"},
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]
[package.extras]
brotli = ["brotli (>=1.0.9)", "brotlicffi (>=0.8.0)"]
socks = ["pysocks (>=1.5.6,!=1.5.7,<2.0)"]
zstd = ["zstandard (>=0.18.0)"]
[metadata]
lock-version = "2.0"
python-versions = ">=3.9.9,<3.11"
content-hash = "97bd296adc5a4e0c9d69f5be058b42eb938c22c8194b35a9ad7aaba90c019c46"