OME-Zarr viewer plugin for napari with iohub as the I/O backend.
Widgets are provided for different visualization use cases:
- Multi-well plate (high-content screening, HCS) viewer
- Label editor
Usage documentation can be found in the wiki.
This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.
First, install napari.
You can then install napari-iohub via pip:
git clone https://github.com/czbiohub/napari-iohub.git
pip install ./napari-iohubContributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.
Distributed under the terms of the BSD-3 license, "napari-iohub" is free and open source software.
If you encounter any problems, please file an issue along with a detailed description.
Designed for the intracellular dashboard project by the Computational Microscopy team at the Chan Zuckerberg Biohub SF.