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  1. denovopipeline denovopipeline Public

    Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.

    Python 25 8

  2. rki-mf1/breakfast rki-mf1/breakfast Public

    breakfast is a simple and fast tool for clustering SARS-CoV-2 genomes using precalculated sequence features (e.g. nucleotide substitutions).

    Python 10 1

  3. BacterialGenomeAnalysis BacterialGenomeAnalysis Public

    Automated pipeline for whole bacterial genome analysis based on snakemake

    Python 10