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More file formats and improved MGH header support

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@dfsp-spirit dfsp-spirit released this 17 Feb 16:51
· 430 commits to master since this release
  • Add support for reading surfaces in FreeSurfer ASCII surface format (integrated into read.fs.surface)
  • Add high-level functions 'read_nisurface' and 'read_nisurfacefile' to read surface files in different formats
  • Add support for writing surfaces in FreeSurfer ASCII surface format: 'write.fs.surface.asc'
  • Turn return value data structure of read.fs.mgh into 'fs.volume' class and implement 'print' and 'is' S3 methods
  • Support reading the ASCII version of FreeSurfer curv format files (integrated into read.fs.curv)
  • Support reading the FreeSurfer weight or 'w' format files (read.fs.weight), both ASCII and binary subtypes are supported
  • Add support for reading binary patch files
  • Add support for reading ASCII patch files
  • Fix skipping header bytes while reading mgz files (issue #10)
  • Read fov MR acquisition parameter from MGH header, make mr_params parameter of write.fs.mgh length 5 from 4
  • Compute dof and various other header fields from MGH header data, add new functions to derive matrices
  • Add a third vignette that explains how to compute the MGH header data