Late task tutorials #34
Merged
Commits on Oct 23, 2023
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Add initial conditions section
Added text and code to initial conditions section and updated initial plot to have same initial conditions
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Add generating trajectories section
Added content to generating trajectories, which details specifying the initial conditions, demography vector and running the model
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Content edits and reordering of some text
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Updated name to simulating_transmission to better reflect tutorial content
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Citations have been changed to hyperlinks, so references no longer needed in Rmd header
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Added tutorial content on all sections for Choosing a model
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Add 'Coming soon' to incomplete sections
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Added section on how to account for uncertainty in R0 for influenza example
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Updated challenge outline to address #27 and to include Carpentries hint structure
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Add glossary and add terms to
simulating_transmissionGlossary added in response to #24, additional transmission types added to `simulating_transmission` tutorial
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Fixes #26 for `simulating_transmission` and `compare_scenarios`
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Update package and function notation
Fixes #25 for current tutorials
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Add definitions of outbreak and epidemic
Added to `model_choices` tutorial and relevant definitions added to glossary
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Remove reference to epidemic versus outbreak
Keep tutorial content on the types of model used for epidemic versus outbreak analysis, but remove exact reference to epidemic and outbreak model types
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Split `compare_interventions` into two tutorials : `modelling_interventions` and `compare_interventions`
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Add section on mask wearing and vaccination
Updates to school closure section as well as added sections on mask wearing and vaccination
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Updating filenames to be consistent with the default naming of episodes from `create_episode`
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Revert "Revert "Remove default lesson""
This reverts commit 8089e4c.
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Commits on Oct 24, 2023
Commits on Oct 26, 2023
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Merge branch 'late_task_1' of https://github.com/epiverse-trace/tutor…
…ials into late_task_1
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Commits on Oct 30, 2023
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Update episodes/model-choices.Rmd
Co-authored-by: Pratik Gupte <[email protected]>
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Updated code to run multiple model simulations to be the same as vignette and replaced {data.table} functions with `stat_summary()` stay within Tidyverse -
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Commits on Oct 31, 2023
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