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Updated link to preprint
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Ian Holmes committed Mar 17, 2017
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**"What's The Function of these genes?"**

Answer this question with Bayesian [Term Enrichment Analysis](https://en.wikipedia.org/wiki/Gene_Ontology_Term_Enrichment) (TEA)
using a model described [here](https://github.com/ihh/wtfgenes-appnote/blob/master/main.pdf)
using a model described [here](https://github.com/ihh/wtfgenes-paper/blob/master/preprint.pdf)
and loosely based on the following method:

- Nucleic Acids Res. 2010. [GOing Bayesian: model-based gene set analysis of genome-scale data.](http://www.ncbi.nlm.nih.gov/pubmed/20172960) Bauer S, Gagneur J, Robinson PN.
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## Basic operation (node script)

The node script is [bin/wtfgenes.js](https://github.com/evoldoers/wtfgenes/blob/master/bin/wtfgenes.js).
The basic sequence of operations is described [here](https://github.com/ihh/wtfgenes-appnote).
The basic sequence of operations is described [here](https://github.com/ihh/wtfgenes-paper/blob/master/preprint.pdf).
Essentially, you run the [MCMC sampler](https://en.wikipedia.org/wiki/Markov_chain_Monte_Carlo) for a while, and then you get a report on which terms are enriched in the dataset.

## Basic operation (web client)
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