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@ikmb

Institute of Clinical Molecular Biology

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  1. MAGScoT MAGScoT Public

    MAGScoT - a MAG scoring and refinement tool

    R 25 1

  2. eagleimp eagleimp Public

    C++ 21 2

  3. amino_acid_encoding_deep_learning_applications amino_acid_encoding_deep_learning_applications Public

    The repository contains all the code for the paper amino acid encoding using deep learning application

    Python 18 5

  4. vcf2prot vcf2prot Public

    Accelerate the generation of personalized proteomes from a Variant calling format (VCF) file and a reference proteome using graphical processing units (GPUs).

    Rust 13 1

  5. gwas-qc gwas-qc Public

    The IKMB GWAS Quality Control Pipeline

    Python 8 3

  6. gwas-assoc gwas-assoc Public

    The IKMB GWAS Association Testing Pipeline

    Python 8 1

Repositories

Showing 10 of 65 repositories
  • TOFU-MAaPO Public

    Nextflow pipeline for the analysis of metagenomic short reads.

    ikmb/TOFU-MAaPO’s past year of commit activity
    Nextflow 7 GPL-3.0 2 0 1 Updated Jul 4, 2024
  • eagleimp Public
    ikmb/eagleimp’s past year of commit activity
    C++ 21 GPL-3.0 2 0 0 Updated Jun 18, 2024
  • catch-all Public

    Data management resources for the clinical research unit catch-all.

    ikmb/catch-all’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Jun 4, 2024
  • ikmb/GP2_dataset_analysis’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated May 10, 2024
  • finemapping Public

    A Nextflow framework for finemap

    ikmb/finemapping’s past year of commit activity
    Python 1 GPL-3.0 1 0 0 Updated Apr 26, 2024
  • hybridgwais-fpga Public

    FPGA design files for HybridGWAIS

    ikmb/hybridgwais-fpga’s past year of commit activity
    VHDL 0 GPL-3.0 0 0 0 Updated Apr 24, 2024
  • phewas-assoc Public

    The IKMB Association Testing Pipeline for PheWAS

    ikmb/phewas-assoc’s past year of commit activity
    Python 1 GPL-3.0 0 0 0 Updated Apr 17, 2024
  • ikmb/cfDNA-quantile’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Apr 4, 2024
  • ikmb/HLApipePublic’s past year of commit activity
    R 2 GPL-3.0 2 5 0 Updated Mar 28, 2024
  • BloodTypingArray Public

    The software for the Intitutes genotyping array based blood group typing

    ikmb/BloodTypingArray’s past year of commit activity
    C++ 0 MIT 1 0 0 Updated Mar 4, 2024

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