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  1. publications publications Public

    PDFs for my peer-review scientific publications

  2. veba veba Public

    A modular end-to-end suite for in silico recovery, clustering, and analysis of prokaryotic, microeukaryotic, and viral genomes from metagenomes

    Python 69 9

  3. ensemble_networkx ensemble_networkx Public

    Ensemble networks in Python

    Python 4 1

  4. clairvoyance clairvoyance Public

    AutoML simultaneous bayesian hyperparameter optimization and feature selection

    Python 6

  5. pykofamsearch pykofamsearch Public

    Fast implementation of KofamScan optimized for high-memory systems using PyHmmer

    Python 3 1

  6. pyhmmsearch pyhmmsearch Public

    Fast implementation of HMMSEARCH optimized for high-memory systems using PyHmmer

    Python 1