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@kr-colab

Kern-Ralph CoLab

Repositories associated with the collaborary research group of Andrew Kern and Peter Ralph

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  1. diploSHIC diploSHIC Public

    feature-based deep learning for the identification of selective sweeps

    Python 49 14

  2. locator locator Public

    deep learning prediction of geographic location from individual genome sequences

    Python 46 18

  3. popvae popvae Public

    genotype dimensionality reduction with a VAE

    Python 40 9

  4. ReLERNN ReLERNN Public

    Recombination Landscape Estimation using Recurrent Neural Networks

    Python 47 11

  5. spaceness spaceness Public

    Space is the Place: Effects of Continuous Spatial Structure on Analysis of Population Genetic Data

    HTML 7 3

Repositories

Showing 10 of 23 repositories
  • spatial_sims_standard Public

    standardizing spatial simulation slim scripts with a template

    kr-colab/spatial_sims_standard’s past year of commit activity
    Jupyter Notebook 1 0 0 1 Updated Jul 4, 2024
  • mapNN Public

    neural network for estimating demographic maps from SNPs

    kr-colab/mapNN’s past year of commit activity
    Python 5 MIT 1 1 0 Updated Jun 30, 2024
  • diploSHIC Public

    feature-based deep learning for the identification of selective sweeps

    kr-colab/diploSHIC’s past year of commit activity
    Python 49 MIT 14 6 1 Updated May 9, 2024
  • popvae Public

    genotype dimensionality reduction with a VAE

    kr-colab/popvae’s past year of commit activity
    Python 40 9 3 1 Updated Apr 23, 2024
  • ReLERNN Public

    Recombination Landscape Estimation using Recurrent Neural Networks

    kr-colab/ReLERNN’s past year of commit activity
    Python 47 MIT 11 8 0 Updated Mar 13, 2024
  • disperseNN2 Public

    estimating dispersal distance from georeferenced polymorphisms

    kr-colab/disperseNN2’s past year of commit activity
    Python 3 MIT 2 6 0 Updated Feb 1, 2024
  • greatapes_sims Public
    kr-colab/greatapes_sims’s past year of commit activity
    Jupyter Notebook 1 0 2 0 Updated Oct 5, 2023
  • disperseNN Public

    Estimating dispersal using deep neural networks

    kr-colab/disperseNN’s past year of commit activity
    Python 6 4 0 0 Updated Sep 29, 2023
  • product-space-FEM Public
    kr-colab/product-space-FEM’s past year of commit activity
    Jupyter Notebook 2 2 4 0 Updated Aug 9, 2023
  • locator Public

    deep learning prediction of geographic location from individual genome sequences

    kr-colab/locator’s past year of commit activity
    Python 46 18 8 2 Updated Jul 12, 2023
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