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marschall-lab

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  1. panacus panacus Public

    Panacus is a tool for computing statistics for GFA-formatted pangenome graphs

    Rust 67 4

  2. GFAffix GFAffix Public

    GFAffix identifies walk-preserving shared affixes in variation graphs and collapses them into a non-redundant graph structure.

    Rust 33 5

  3. gaftools gaftools Public

    General purpose utility related to GAF files

    Python 8

  4. project-male-assembly project-male-assembly Public

    HGSVC SIG: targeted chromsome Y assembly

    Jupyter Notebook 5

  5. hrfs hrfs Public

    Analysis of the set of founder sequences under a homologous recombination model

    Rust 4

  6. strand-seq-graph-phasing strand-seq-graph-phasing Public

    R 3 1

Repositories

Showing 9 of 9 repositories
  • marschall-lab.github.io Public

    Group website of the Marschall Lab

    marschall-lab/marschall-lab.github.io’s past year of commit activity
    SCSS 0 MIT 1 3 0 Updated Jul 5, 2024
  • spp_dcj_v2 Public
    marschall-lab/spp_dcj_v2’s past year of commit activity
    C++ 0 MIT 0 0 0 Updated Jul 3, 2024
  • gaftools Public

    General purpose utility related to GAF files

    marschall-lab/gaftools’s past year of commit activity
    Python 8 MIT 0 1 0 Updated Jun 27, 2024
  • panacus Public

    Panacus is a tool for computing statistics for GFA-formatted pangenome graphs

    marschall-lab/panacus’s past year of commit activity
    Rust 67 MIT 4 2 1 Updated Jun 26, 2024
  • strand-seq-graph-phasing Public
    marschall-lab/strand-seq-graph-phasing’s past year of commit activity
    R 3 MIT 1 9 1 Updated Jun 20, 2024
  • GFAffix Public

    GFAffix identifies walk-preserving shared affixes in variation graphs and collapses them into a non-redundant graph structure.

    marschall-lab/GFAffix’s past year of commit activity
    Rust 33 MIT 5 4 0 Updated Feb 16, 2024
  • project-male-assembly Public

    HGSVC SIG: targeted chromsome Y assembly

    marschall-lab/project-male-assembly’s past year of commit activity
    Jupyter Notebook 5 MIT 0 3 0 Updated Apr 12, 2023
  • hrfs Public

    Analysis of the set of founder sequences under a homologous recombination model

    marschall-lab/hrfs’s past year of commit activity
    Rust 4 MIT 0 0 0 Updated Jan 23, 2023
  • panpa Public

    PanPA is a tool for generating alignment of protein graphs

    marschall-lab/panpa’s past year of commit activity
    1 GPL-3.0 0 0 0 Updated Nov 21, 2022

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