Bundle cortical brain network/parcellation that are publicly available in a convenient form to use in R
- https://www.lead-dbs.org/helpsupport/knowledge-base/atlasesresources/cortical-atlas-parcellations-mni-space/
- aging parcellation: https://github.com/hldeepblue/aging_parcellation
- use
cifti
,gifti
pacakges - Gordon 333 (fs_LR)
- Power 2011 (fs_LR)
- Schafer
- Yeo?
- Chan 2014
- Han 2018 - 5 age groups
- Look into portion of R-for-brain-network repo
cii2mat.R
,gii2mat.R
- Use the above function within a wrapper to use the default atlases?
- Use
oro.nifti
orRnifti
- MNI based atlas? + Power 2011 coordinates are in MNI, create sepheres in 333? + Han 2018 has NIFTI files for 5 age groups
- FreeSurfer native-space based segmentation + The function has to take in a segmentation files in mgz format?