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New England Biolabs Inc.

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  1. plate-map plate-map Public

    A flexible tool for defining the contents of 96 well plates.

    JavaScript 47 13

  2. EM-seq EM-seq Public

    Tools and Data related to Enzymatic Methylation Sequencing

    Nextflow 15 2

  3. ampseer ampseer Public

    Ampseer examines reads in fastq format and identifies which multiplex PCR primer set was used to generate the SARS-CoV-2 sequencing library they are read from. It is intended to differentiate betwe…

    Rust 14 1

  4. VarSkip VarSkip Public

    VarSkip multiplex PCR designs for SARS-CoV-2 sequencing

    13 9

  5. domainator domainator Public

    A flexible and modular software suite for domain-based gene neighborhood and protein search, extraction, and clustering.

    Python 11

  6. nebnext-single-cell-rna-seq nebnext-single-cell-rna-seq Public

    Adapter trimming directions for NEBNext Single Cell/Low Input RNA Library Prep Kit for Illumina

    4 2

Repositories

Showing 10 of 54 repositories
  • domainator Public

    A flexible and modular software suite for domain-based gene neighborhood and protein search, extraction, and clustering.

    nebiolabs/domainator’s past year of commit activity
    Python 11 0 14 0 Updated Jul 3, 2024
  • iwc Public Forked from galaxyproject/iwc

    Intergalactic Workflow Commission

    nebiolabs/iwc’s past year of commit activity
    Python 0 55 0 0 Updated Jun 29, 2024
  • FFPE_nextflow_workflow Public

    Workflow to analyze FFPE ngs data

    nebiolabs/FFPE_nextflow_workflow’s past year of commit activity
    Nextflow 0 AGPL-3.0 0 0 1 Updated Jun 28, 2024
  • plate-map Public

    A flexible tool for defining the contents of 96 well plates.

    nebiolabs/plate-map’s past year of commit activity
    JavaScript 47 AGPL-3.0 13 7 5 Updated Jun 20, 2024
  • rsvAB-sequencing Public

    NEBNext RSV A/B Multiplex PCR sequencing primers

    nebiolabs/rsvAB-sequencing’s past year of commit activity
    0 AGPL-3.0 0 0 0 Updated Jun 3, 2024
  • iiMS_InfluenzaA Public

    NEBNext iiMS Influenza A Library Prep for ONT

    nebiolabs/iiMS_InfluenzaA’s past year of commit activity
    1 AGPL-3.0 0 0 0 Updated Jun 3, 2024
  • EM-seq Public

    Tools and Data related to Enzymatic Methylation Sequencing

    nebiolabs/EM-seq’s past year of commit activity
    Nextflow 15 AGPL-3.0 2 5 0 Updated Jun 3, 2024
  • fatools Public Forked from trmznt/fatools

    A Python library for performing DNA fragment-analysis

    nebiolabs/fatools’s past year of commit activity
    Python 0 LGPL-3.0 10 1 0 Updated May 31, 2024
  • domainator_examples Public

    Advanced examples of how to use the Domainator bioinformatics software suite

    nebiolabs/domainator_examples’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Apr 24, 2024
  • ampseer Public

    Ampseer examines reads in fastq format and identifies which multiplex PCR primer set was used to generate the SARS-CoV-2 sequencing library they are read from. It is intended to differentiate between ARTIC v3, ARTIC v4, ARTIC v4.1, VarSkip 1a, VarSkip 2, Midnight and VarSkip Long primer sets sequenced by Illumina or ONT.

    nebiolabs/ampseer’s past year of commit activity
    Rust 14 AGPL-3.0 1 5 0 Updated Feb 27, 2024

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