Fixed bug that disallows sequences with NodeEvolution_None

niemasd · Jul 23, 2021 · acee242 · acee242
1 parent f058a85
commit acee242
Show file tree

Hide file tree

Showing 3 changed files with 3 additions and 3 deletions.
diff --git a/modules/FAVITES_GlobalContext.py b/modules/FAVITES_GlobalContext.py
@@ -16,7 +16,7 @@
     import queue as Q
 
 # useful constants
-FAVITES_VERSION = "1.2.8"
+FAVITES_VERSION = "1.2.9"
 C_INT_MAX = 2147483647
 CITATION_ART = 'Huang W., Li L., Myers J.R., Marth G.T. (2012). "ART: a next-generation sequencing read simulator". Bioinformatics. 28(4), 593-594.'
 CITATION_DENDROPY = 'Sukumaran J., Holder M.T. (2010). "DendroPy: A Python library for phylogenetic computing". Bioinformatics. 26, 1569-1571.'

diff --git a/modules/NodeEvolution_None.py b/modules/NodeEvolution_None.py
@@ -15,7 +15,7 @@ def cite():
         return GC.CITATION_FAVITES
 
     def init():
-        assert "SequenceEvolution_NoMutation" in str(MF.modules['SequenceEvolution']) or "SequenceEvolution_NoSeqs" in str(MF.modules['SequenceEvolution']), "Must use SequenceEvolution_NoMutation or SequenceEvolution_NoSeqs module"
+        pass
 
     def evolve_to_current_time(node, finalize=False):
         if node is None:

diff --git a/run_favites.py b/run_favites.py
@@ -72,4 +72,4 @@ def parseArgs():
     parseArgs()
 
     # run Driver
-    MF.modules['Driver'].run('/'.join(expanduser(abspath(argv[0])).split('/')[:-1]), ORIG_CONFIG)
+    MF.modules['Driver'].run('/'.join(expanduser(abspath(argv[0])).split('/')[:-1]), ORIG_CONFIG)