SeqPlotter: Python package for sequence data analysis and visualization

Introduction

SeqPlotter is a Python package developed to streamline the visualization and analysis of biological sequence data. It provides seamlessly integration into your Python workflow, with robust data handling capabilities, intuitive visualization, and useful analysis features. From parsing raw sequence files to creating stunning plots and charts.

Requirements

• Python >=3.8
• Git

Installation

pip

git clone https://github.com/rajanbit/SeqPlotter.git
cd SeqPlotter/
python -m pip install --upgrade build
python -m build
pip install dist/SeqPlotter-0.3.0-py3-none-any.whl

conda

conda create -n seqplotter python=3.8 git
conda activate seqplotter
pip install git+https://github.com/rajanbit/SeqPlotter.git#egg=SeqPlotter

Documentation

• User Guide: https://github.com/rajanbit/SeqPlotter/blob/main/docs/SeqPlotter_user_guide.pdf
• Tutorials: https://github.com/rajanbit/SeqPlotter/blob/main/docs/SeqPlotter_tutorial.ipynb

Citation

Rajan. (2024). SeqPlotter: Python package for sequence data analysis and visualization (v0.1.0). Zenodo. https://doi.org/10.5281/zenodo.10645748